Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03968 ATGCTTGTCTGTGCAGCGAGCGCAGGTGTGACTCACACTCCTCCACACTCTTCGCTCAGCTTCTGCTCTTCCAACTCCAAATCCCACCGAATTTTCTCCAATTCAGTCAGTCTCCCTATCACGCACAACGACAACCCTACCTCCGATTCCGATGACGCCCTCCGCCTCACCGTGCCTTCTGCCGCCGCTGTTGCCTCCGCCATTCGCAAGGCCTCCACCTCCCCCGTACAGTTCACCCAGACCCTCCAGACCGATCGCCAAACCGGACTCGTGCTTCCCAGCACTGACTTCCATCGACTCTGTCTCCACCAGCTTCACCTCTTTCGCAGGATCGTTCCCGAAGCCCTACTCTCGGTGTATGTCAGACCGGCTGGTAGTTATGTGATGGATCGGTTGGAGCTTCGACGGGTTGCACTGTACCCTGGAGATGCAGAGTCAGAGGGCATTGTCATTCTTGTGGGTCATTTTAGTATTCCTGCGGGCTTGCGTACTGCTGAGGCCACACTTTCCAATTTGCAAGTTAATGTTGTCCCTGAATGCAAGGCTGTCGTTCTTCCAATGGTGAAACACCCATTTGTTGTTGGTTTCTTGGTTGCTGAGCTTCCATTGGTGGAGCAGGAACAGTGTCAGAAACCTCAAAGTGAAGGTCCAGATATCCACATGTCTGTTGAGGAAGCTTATTCGTTGCCTCCCTTCTTGGATTTAGACAAGAAGTCGCGGGACATTCAGACCCTTCGGGTCAAGGACGAAGCAGTTGGTATGCGTAACTTCACTTCTGAGCAAAGATCAAATGCTGTCAACATTTCACAGTCTCTTGCTATGGCATATGTGATGGATCAGAAAGCAATGTTACTTCAGCAATCAACATGGCAAAATAATGTCAGAATGGGTAATCTGGTTGAGCAAATCCGTGGTCCACTTTCCAGTATTCAAACCTTAAGTAAAATCCTGTCTGCACAGACAAAGAGAACTCAGATTTCATATGACATTGTTGAAGACCTCTTGGTGCAAGGTAATCGTTTGAGGGATGTTCTCCAACAACTACAGGATGCTGTTTATTTGACAAAGAATAATATAGTGCGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTCTGCCCACATACTTGCTGAATCAGCTAGATCTCAATTGCTAGATAGCTCCCCTGGGGATGATCACTCTTCAAATAAAATGAAAAAGTCTAGTGAGTCACTTTCTCTAACTTCTGCTGTCCACGATATAGAGATGCCACTACCACCTTTGGCTCTTGCTCCATTGCAACATGGAATCAGATCATGCAATGTTTCTGAAGTATTGACAGAATTAGTTGATTCAGTTAGACCACTTGCCCAGAGTCAAAAACGTTTGGTGGAACTAAGTGAACTCTCGTCACCTTTGCTAGCTGCTGTAGAAGAACCTGCACTGCGCCAGGCTTTCAGTAATCTTATTGAAGGTGCTTTACTACGGACGCATGTTGGAGGAAAGGTTGAAATTGTATCTACTGCAGCACCAGCTGGTGGCACCCTTGTACTTATTGATGATGATGGTCCTGATATGCACTACATGACTCAGATGCACTCACTCACACCTTATGGACAAGAACTGTTGTCTGATGGTATGATTGAGGACAATATGACTTGGAACTTTGTTGCTGGGATGACTGTTGCTCGTGAGATACTAGAAAGCTATGGGTGTGTCGTCCGTATCGTTTCACCTCGGATTAAAGATGCTCCTCTGGGAGCTGGGGGAACACGTCTAGAACTCTGGCTTCCTTCAATTGCAAAATCTGATTTGAGCAGCCACACCCAAGAGGGTATAGCATGA 1827 0.4707 MLVCAASAGVTHTPPHSSLSFCSSNSKSHRIFSNSVSLPITHNDNPTSDSDDALRLTVPSAAAVASAIRKASTSPVQFTQTLQTDRQTGLVLPSTDFHRLCLHQLHLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGDAESEGIVILVGHFSIPAGLRTAEATLSNLQVNVVPECKAVVLPMVKHPFVVGFLVAELPLVEQEQCQKPQSEGPDIHMSVEEAYSLPPFLDLDKKSRDIQTLRVKDEAVGMRNFTSEQRSNAVNISQSLAMAYVMDQKAMLLQQSTWQNNVRMGNLVEQIRGPLSSIQTLSKILSAQTKRTQISYDIVEDLLVQGNRLRDVLQQLQDAVYLTKNNIVRYNEEAIKKMNGSAHILAESARSQLLDSSPGDDHSSNKMKKSSESLSLTSAVHDIEMPLPPLALAPLQHGIRSCNVSEVLTELVDSVRPLAQSQKRLVELSELSSPLLAAVEEPALRQAFSNLIEGALLRTHVGGKVEIVSTAAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELLSDGMIEDNMTWNFVAGMTVAREILESYGCVVRIVSPRIKDAPLGAGGTRLELWLPSIAKSDLSSHTQEGIA 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03968 608 Coils Coil 331 365 - -
Vimu11g03968 608 Gene3D - 427 593 IPR036890 -
Vimu11g03968 608 MobiDBLite consensus disorder prediction 384 405 - -
Vimu11g03968 608 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 431 572 IPR036890 -
Vimu11g03968 608 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 18 604 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03968 - - gmx:100792515 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03968 11 61528378 61534653 Vimu11g03968 11 61528378 61534653 ECH