Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03956 ATGTCTCGTCGAGAAACAAACCCTCATTTTTCTCGACCACCACACCCTCAATTCCTCATAGATGATGATCATAAAGATAAACCACATATTTCATCTGGGCCACACCAAAAACCTCGCCGTGCCCAACCACCCCCTCAGGTAATACCTGCTGCACCTATACCTCAGAACGAAGATCTTCTTCCATTACGATCACGACCTCAACACGAAGACCATGTTCAATCACAAGATCACCCACCTATTTCCCAAGGACCACGCTCAAAAAGAAGTCCAAGTAAATATCCAACAAATCAAGGTTTCCGACCAGTTAAGTCCTCAAAGGTAAATTTCCAAGAGCCACCTCCATCTGCCGAAGCCCCTCCGCCGCTGCCACCCTCCGACAACCCTCCTCTGCCACGCCGTAAGCCCCTCAGTGATCTCCGCCACACTGGTATAAAGTTGCCGGAGGAGCCAAAGTCTCCACCTTTGACATGGTTAGGTGCGTGCTTGTGTGTGATATTTTGGCTCATCATAATCATAGGAGGGTTGATAGTGCTTATAGTGTACTTTGTTTTTCGGCCACAAAGTCCTCATTTTGATGTGTCTAGTGTGACCTTAAATGCTGCATACCTCGACCTTGGGTATCTGCTGAATGCTGATCTAACCATGCTGGCTAACTTCACAAACCCAAACAAGAAGGTGCACGTGGACTTCAGCTCTGTCATCATTTATCTCTACTATGGAAGCACCCTCATTGCCACACAGTATGTTGAGCCTTTCTCTGCTGCAAGGCTTCAATCAAGGTTTGCAACGATCCACATGGTGTCTAGCCAGGTTCAGCTGCCATTGAGAGAAAGCCAGCGCCTTGTCAAACAGATGGAGGGCAATGGCGTGATTCTCGAAGTGAGGGGAATATTTCGTGCAAGATCCAAACTGGGTACCATTTTGAGGTATTCGTATAATCTCTATGGCCGATGCAGCGTCATGCTAACACGTCCTCCTGATGGCATTATGCTCAAAAAGAAATGCAGAACGAAGCGCTGA 1020 0.4755 MSRRETNPHFSRPPHPQFLIDDDHKDKPHISSGPHQKPRRAQPPPQVIPAAPIPQNEDLLPLRSRPQHEDHVQSQDHPPISQGPRSKRSPSKYPTNQGFRPVKSSKVNFQEPPPSAEAPPPLPPSDNPPLPRRKPLSDLRHTGIKLPEEPKSPPLTWLGACLCVIFWLIIIIGGLIVLIVYFVFRPQSPHFDVSSVTLNAAYLDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYVEPFSAARLQSRFATIHMVSSQVQLPLRESQRLVKQMEGNGVILEVRGIFRARSKLGTILRYSYNLYGRCSVMLTRPPDGIMLKKKCRTKR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03956 339 MobiDBLite consensus disorder prediction 1 33 - -
Vimu11g03956 339 MobiDBLite consensus disorder prediction 1 137 - -
Vimu11g03956 339 MobiDBLite consensus disorder prediction 113 131 - -
Vimu11g03956 339 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 148 321 - -
Vimu11g03956 339 MobiDBLite consensus disorder prediction 76 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03956 Vimu-Chr11 61445910 61447180 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03956 - - var:108337628 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03956 11 61445910 61447180 Vimu11g03956 11 61445910 61447180 ECH