Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03431 ATGAAGGAGGTTAACTCATCTGGCATTGGAATGGCCACAAGGGAAGCTTACTCGCAAATACCTAAGAAGAAAGTTCCTCTCCTTCCTCTTCTCTCTCTTCTCTGCTTCACTTCCATCTTCCTCCTTCTCTCCCAATTCAGAACTACCTCCTCCCCTTCCATAACCCACTCTCTTCCCACCTTCCACAAACGCACCCAAGCTTCCTGCAATTTCTCCGACGGAAAATGGATCACTCATCCTCCCAGAATTCCAACCTACGACCACACCTGCAAGGAGATCTTCAAGGGCTGGAACTGCCTCTCCGCCAACAAATCCAACGCCCCTCTTCTCCCCACCTGGCGCTGGCAGCCCCGCCACTGCGATCTCCCCCAATTCCATCCCCTTAACTTCCTCCGCACTCACACACACACCGCCATTGGTACACCTTCTCACTTTCTCTCTCTTCTTTTGTTTGGGATTGTCAATAATGGGTGTTCAGCAGTGCAGGGTTTGTCGGGGACTCGCTCAACAGGAACATGTTTGTGTCTCTCTTCTGCGCTCTCAAGAGTGCCTCCGAGGGCCAAGTCAAGAAGTGGCGCCCCGCTGGGGCTGACCGTGGATTCACCTTCCTCGCTTACAATCTCACCATCGCCTATCACCGTACCAATCTTCTCGCTCGTTATGGTAGGTAAGCTTGCGTTTTTCTCATTCATTACTCTTTCCTCTCCTGTTTTTCACGCCTGTTTTCTTCTGGGTCTTGTTTCAAATGATCTGCTCTGGTCCGCTAGTGATAAAGGTGGTGCCTTAGAAACTCTTGGATTCAGAGAGGGATATAGAGTTGATGTTGATGTTCCAGACAGCACGTGGGCAAAGGCTCTGAGTTTCCACGATATTTTAATTTTTAACACGGGACACTGGTGGTGGGCCCCTTCAAAATTTGACCCTGTTAAGTCCCCCATGCTTTTCTTCAAGAATGACCAGCCGGTAATCCCTCCAATACGTCCAGATCAAGGCCTGGATTTGGTTTTGGAGCACATGATCAAGTATGTGGAGAAAAATGCACGGCCTGGTGCAGTCAAATTTTTTCGTACTCAATCACCCAGACACTTTGAAGGAGGAGATTGGGATCAGGGTGGTTCCTGTCTAAGGGATAGACCTTTGTCGATAGAGCAGGTAGAAGAACTTTTCTCCGTGAAGAATAATGGGACAAATGTGGAGACTCGACTGGTGAATGATCACCTCTATAAGGCTCTCGAGGGGTCTGATTTCATTATTTTGGACGTCACTCACATGAGTGAGTTCAGGGCTGATGCACACCCTGCTTCAGCTGGAGGGAAAAAACATGATGATTGTATGCACTGGTGCTTACCTGGAATTACAGATACCTGGAATGATTTGTTCATAGAGCTTCTGAACAGTAAGAAGTATCAAGGGTAG 1416 0.4845 MKEVNSSGIGMATREAYSQIPKKKVPLLPLLSLLCFTSIFLLLSQFRTTSSPSITHSLPTFHKRTQASCNFSDGKWITHPPRIPTYDHTCKEIFKGWNCLSANKSNAPLLPTWRWQPRHCDLPQFHPLNFLRTHTHTAIGTPSHFLSLLLFGIVNNGCSAVQGLSGTRSTGTCLCLSSALSRVPPRAKSRSGAPLGLTVDSPSSLTISPSPITVPIFSLVMVGKLAFFSFITLSSPVFHACFLLGLVSNDLLWSASDKGGALETLGFREGYRVDVDVPDSTWAKALSFHDILIFNTGHWWWAPSKFDPVKSPMLFFKNDQPVIPPIRPDQGLDLVLEHMIKYVEKNARPGAVKFFRTQSPRHFEGGDWDQGGSCLRDRPLSIEQVEELFSVKNNGTNVETRLVNDHLYKALEGSDFIILDVTHMSEFRADAHPASAGGKKHDDCMHWCLPGITDTWNDLFIELLNSKKYQG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03431 471 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 269 462 IPR026057 GO:0016740
Vimu11g03431 471 Pfam PMR5 N terminal Domain 68 121 IPR025846 -
Vimu11g03431 471 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 44 134 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03431 Vimu-Chr11 55518477 55521552 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03431 - - vun:114178550 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03431 11 55518477 55521552 Vimu11g03431 11 55518477 55521552 ECH