Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03415 ATGGAGTTACGTGAGCTTGGTAGAACCGGACTGAAACTCAGCTGCATCGGTTTCGGAGCTTCTCCACTGGGCAATGTCTTCGGCACAGTTTCCGAGGAACAGGCCAACGCTTCCGTTCGCCTCGCCTTTCAATCCGGCGTCAATTTCTTCGACACTTCTCCGTATTACGGCGGGACACTGTCGGAGAAAGTGCTGGGGAAGGCACTGAAGGCTCTCGAAGCTCCTCGGAGCTCCTACGTTGTGGCGACGAAGTGCGGACGGTACGTCGACGGTTTTGATTTCAGCGCGGAGAGAGTCACGAGGAGCGTGGAAGAGAGCTTGGAGAGGTTGCAGCTTGATTACGTTGACATTCTCCAGTGCCACGACATCGAGTTCGGTTCCCTAGACCAGATCGTGAACGAGACGATTCCGGCGCTGGTGAAATTGAAGGAGGCGGGGAAGACGCGTTTCATCGGCATAACGGGGCTTCCCCTGGGGATTTTCAGTTACGTGCTTGATAGGGTTCCGCCTGGGACGCTTGATGTGGTGCTTTCGTATTGCCATTACTCTGTGAACGACTCCAGTTTGGGGGATTTGATACCCTATTTGAAGGCCAAAGGGGTTGGCATCATTAATGCTTCTCCTCTCTCCATGGGTCTTCTCACTCATGCTGGCCCACCTCCATGGCATCCGGCTTCGCCCCAACTCAAGTCTGCATGCGAAGCTGCTGCCGCTCATTGTAAAGAAAAGGGAAAAAACATTTCAAAGTTAGCGTTGCAGTACAGCTTGTTGAATAAGGAAATCTCATCAGTGCTTGTAGGCATGAAGTCCGTTGAACAGGTGGAGGAAAATGTTGCTGCTGCACGAGAACTAGCTAATAGTGGCATTGATGAAGAGGCTCTATCAGAAGTTGAAGCTATTCTGAAGCCTGTTAAAAATCAGTCATGGCCAAGTGGAATCCAGCAGAGCTGA 951 0.5174 MELRELGRTGLKLSCIGFGASPLGNVFGTVSEEQANASVRLAFQSGVNFFDTSPYYGGTLSEKVLGKALKALEAPRSSYVVATKCGRYVDGFDFSAERVTRSVEESLERLQLDYVDILQCHDIEFGSLDQIVNETIPALVKLKEAGKTRFIGITGLPLGIFSYVLDRVPPGTLDVVLSYCHYSVNDSSLGDLIPYLKAKGVGIINASPLSMGLLTHAGPPPWHPASPQLKSACEAAAAHCKEKGKNISKLALQYSLLNKEISSVLVGMKSVEQVEENVAAARELANSGIDEEALSEVEAILKPVKNQSWPSGIQQS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03415 316 CDD AKR_galDH 1 295 IPR044479 GO:0010349
Vimu11g03415 316 Pfam Aldo/keto reductase family 16 282 IPR023210 -
Vimu11g03415 316 FunFam Aldo/keto reductase 1 311 - -
Vimu11g03415 316 PANTHER GH17980P-RELATED 1 314 IPR020471 GO:0016491
Vimu11g03415 316 Gene3D - 1 313 IPR036812 -
Vimu11g03415 316 SUPERFAMILY NAD(P)-linked oxidoreductase 1 303 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03415 Vimu-Chr11 55356036 55358320 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03415 K17744 - gmx:100809400 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03415 11 55356036 55358320 Vimu11g03415 11 55356036 55358320 ECH