Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03374 ATGGCAGCATCTTGCTACTGTAAGAAAAGCTATTTAAGTGCTTGTTTTTATGTAACATTAACACTCTTGCTTCTTGTAACACCTCATGCAGCTTCATTGGAATTCAACTATCAGCAATTTGGTGACACTGGAAACGACTTCAATACCTCGGGTGATGTTCAAGCTGTGCAAGGAATCCTCCAACTCACCGAGTATAAGCCAGATAGTTATGGTAGAGTCGTATATAACAAACTATTGCATCTTTGGGACAAGAGTTCGGGAAAGGTTGCAGATTTCACTACCCATTTCTTCTTTACCATCAACACCCCAAATAAAACCTATCATGGAGATGGAATCACCTTCTTTCTGGCAGATCCAAAGTTTCCAGACTCCAAAATAGATGGAAGTGGTATTGGTCTTGCCAGCCGTGAGCAACTGGGGACTATAAATTACGCAAAGGACTTTCCTTTTGTAGCAGTGGAA 462 0.4113 MAASCYCKKSYLSACFYVTLTLLLLVTPHAASLEFNYQQFGDTGNDFNTSGDVQAVQGILQLTEYKPDSYGRVVYNKLLHLWDKSSGKVADFTTHFFFTINTPNKTYHGDGITFFLADPKFPDSKIDGSGIGLASREQLGTINYAKDFPFVAVE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03374 154 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 136 IPR013320 -
Vimu11g03374 154 Pfam Legume lectin domain 32 154 IPR001220 GO:0030246
Vimu11g03374 154 Gene3D - 30 154 - -
Vimu11g03374 154 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 21 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03374 Vimu-Chr11 54517206 54517685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03374 18 154 Receptor kinase-like Gene Family AT5G10530 34.722 2.80e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03374 - - pvu:PHAVU_002G2150000 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03374 11 54517206 54517685 Vimu11g03374 11 54517206 54517685 ECH