Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03336 ATGTCCCGAAACGGCGACGTAGAGGAAGAGAGCGTCGTCACTAGAACAAACAGACCAGACCCTTTCTTGGTAGCGTGCCGCTGCTTCAGCTTCCTCACCTCGCTCGCCGCCATTCTCTGCATCGCCGTCAATGTTCTCTCCGCCGTCCGTTCCTTCAAACACGCATCCGACATTTTCGACGGCATATTCCGCTGTTACGCTGTTATCATAGCGGCTTTTGTGGTGCTCGCTGAGACCGAATGGAGTTTCATCCTCAAGTTCTCTAAGGTTTTGGAGTATTGGGCTGCCAGGGGTATGCTGCAGATCTTTGCTGCTGTCATGACAAGGGCTTTTCCTGACATTACTGGGGAGCGAAGGAACCTTTTTCTTCTTCAGAGCATAGCAAGTTATTTGCTACTTGGCTGTGGCGTTATTTATGTTGTTTCAGGTATCTTGTGCATTGGTTTTCTTAAACGTGCCCGCCAGAAACAGGAGATTACAAGAGAGCAAGCAGCCAAGGATCTCGAGGAATTGGAAAGGCGCAGGGAAGAACTTGAACAACTACTCCTTTCCGAAAGAGTTTAA 564 0.4929 MSRNGDVEEESVVTRTNRPDPFLVACRCFSFLTSLAAILCIAVNVLSAVRSFKHASDIFDGIFRCYAVIIAAFVVLAETEWSFILKFSKVLEYWAARGMLQIFAAVMTRAFPDITGERRNLFLLQSIASYLLLGCGVIYVVSGILCIGFLKRARQKQEITREQAAKDLEELERRREELEQLLLSERV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03336 187 Coils Coil 154 187 - -
Vimu11g03336 187 PANTHER OS07G0118300 PROTEIN 10 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03336 Vimu-Chr11 53937321 53940464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03336 - - pvu:PHAVU_002G213000g 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03336 11 53937321 53940464 Vimu11g03336 11 53937321 53940464 ECH
Vimu11g03336 11 53937321 53940464 Vimu2g00464 2 2639806 2642133 PCT