Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03272 ATGACCCTCTCTCTCCAACAGTGTCCCACTAATGCCTCCCCTTTGCTCTTATTTTATGCTCTGTATCTTTCATCTTCTCTCTCTTTCACCTTTTCTCCTTCACTCTTTTCACTCACTCAAAAACACATTCCCTTTCCTTTCCTCTTCTTTCTGCTAACACCAACATTCTCAAAACAAAAATACCATTACCATTTGCATTTCTCTCAATTAGGGTTCTTCCACCCACTTTCTTCACTACCATTGTCCAAACCTCTCGCATTCTCCGAACCTCTCTGCTTCGGATCAACTCAAATGGGTAAGTACCTTCTGTTACTGGCTCTCACTCTCCTCAACCTCCTACTATTCTCCACCCTTCATGTCTCAGCTGCACCATCAACTACTTCTCCTGCAAAAATTGTTAGTGGGTTTCTCTCTAATGCTGTGCCTGCCGTCACTAAGTGGGTGTGGTCCCTCAAGGCCACCACCAAAACGGGTATGAATGTGGGTTTTTCTGCAGCGGTTTCGAGCAGGTCGATGATGAAGTTCGAGGGTGGATTTAGTGTAGAGACTGTGTTCGATGGGAGCAAGCTTGGGATCGAGCCTTATGCTGTGGAGGTGTTGCCCAATGGGGAGCTTCTGATTCTTGATTCGGCTAATAACAGCAGGCCCAAACTGGTGGCAGGGTCAGCTGAAGGGTATTCTGGACATGTTGATGGGAAGCTCAGGGAGGCTAGGATGAACCACCCTAAGGGGATAACTGTTGACGACCGAGGAAATATCTATGTTGCAGATACTACAAATATGGCAATTAGGAAAATTAGTGATTCAGGTAAAAAGTCCTGTGTGAGTACTGTTATCGTTGGTCCAGAATCTTTGGATTTAAAAATGTGTAACATTGGAGTCAAACAAGGGAACCTCTCAGTGAATATTTCTGTTTCAGGGGTCACGACAATTGCTGGAGGAAAATGGAGCCGAGGAGGGGGGCATGTTGATGGACCAAGTGAAGAAGCTAAGTTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCACTACTCGTCATAGACAGAGGAAACCGAGCCATCAGGGAGATCCAACTCCACTTTGATGATTGTGCCTATCAATATGGCAGTGGATTCCCACTTGGGATTGCAATGCTTGTTGGGGCTGGCTTCTTTGGTTACATGTTGGCATTACTGCAGCGAAGGCTTGGTACAATTGTAGCATCCCAGGACGCTCAGGTTCCGGTAATGGTAACATCTTCAGTTCCTTCAAATCCATATGAAAAGCCGTTGAAATCTGTCAGGCCTCCTTTAATTCCATCGTCAGAATATGAACCTGACAAGCAGGAAGAGGGCTTCTTTGGATCCCTCGGGAAGCTTCTTGCGAATGCTGGTGCATCAATGGTGGAGATAATGGGAGGATTATTTCCTTCTTTCAGAAGAAAATCGCTAAGCCACCAATTCCAAAGACAACCACTTGTCCCGCAACCTCAGAAGCAAGCAAATGCTTGGCCTGTGCAGGAAAGTTTCGTGATCCCTGATGAAGATGAACCTCCTTCCATCGACACAAGAGCTCCTACACCTAGAAAAACCTATCCTTTCATGTCCAAGGATGCAGAGAAAATGCAACAACTTCGGCAAAGTCGTGCATTCTATAGTGGATTGGATGGAGATATGAATCAGCAGCAACAACAGTCACAACAGCAGCAACAGAAACACCATCATCGCCATCAGTACCGATCGGCAACCCCTCACACTTACTACGAGCAGAGCCATGAGACAACCAATGAGATAGTGTTTGGGGCAGTGCAGGAACAGGATAGGAGGCAGGAGTCCGTGGTTATCAAGCCTGTGAATTATGGGGAGCCACTCTATGACACTCACAATGTTAGGTCCAGAATGAGTTTCCTGGGCTATGGCGGCCACAGGTATTGA 1923 0.4618 MTLSLQQCPTNASPLLLFYALYLSSSLSFTFSPSLFSLTQKHIPFPFLFFLLTPTFSKQKYHYHLHFSQLGFFHPLSSLPLSKPLAFSEPLCFGSTQMGKYLLLLALTLLNLLLFSTLHVSAAPSTTSPAKIVSGFLSNAVPAVTKWVWSLKATTKTGMNVGFSAAVSSRSMMKFEGGFSVETVFDGSKLGIEPYAVEVLPNGELLILDSANNSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGKKSCVSTVIVGPESLDLKMCNIGVKQGNLSVNISVSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVASQDAQVPVMVTSSVPSNPYEKPLKSVRPPLIPSSEYEPDKQEEGFFGSLGKLLANAGASMVEIMGGLFPSFRRKSLSHQFQRQPLVPQPQKQANAWPVQESFVIPDEDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSRAFYSGLDGDMNQQQQQSQQQQQKHHHRHQYRSATPHTYYEQSHETTNEIVFGAVQEQDRRQESVVIKPVNYGEPLYDTHNVRSRMSFLGYGGHRY 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03272 640 Pfam NHL repeat 240 265 IPR001258 GO:0005515
Vimu11g03272 640 Gene3D - 303 363 IPR011042 -
Vimu11g03272 640 MobiDBLite consensus disorder prediction 554 585 - -
Vimu11g03272 640 Gene3D - 186 286 IPR011042 -
Vimu11g03272 640 SUPERFAMILY NHL repeat 190 279 - -
Vimu11g03272 640 PANTHER - 303 635 - -
Vimu11g03272 640 MobiDBLite consensus disorder prediction 508 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03272 Vimu-Chr11 52920533 52924284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03272 - - gmx:100781836 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03272 11 52920533 52924284 Vimu11g03272 11 52920533 52924284 ECH