Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03237 ATGGAGACTGTTCCGGGCTATGATGTTGCGGGAGTGGTGGTGAAGGTTGGTAGTGAAGTGAAGGACTTTAAATTGGGTGATGAAGTGTATGGAAATGTAAATGAGAAAGCTTTAGAAGGGCCAAAGCAATTCGGGTCTTTGGCTGAGTACACAGCTGTTGAAGAGAAACTATTGGCAGTAAAACCTAAAAACTTTGACTTTGCTCAGGCTGCTGCTCTTCCTCTAGCAATTGAAACTGCTTATGAGGGTTTGGAGAGGACTGGGTTTTCTCCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGAGGAGTTGGAAGCCTAGTGATTCAGGTATTTCAAAACTTCTCCCCTCTTTGCATGATACATATCATCGCTGACTAA 381 0.4278 METVPGYDVAGVVVKVGSEVKDFKLGDEVYGNVNEKALEGPKQFGSLAEYTAVEEKLLAVKPKNFDFAQAAALPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQVFQNFSPLCMIHIIAD 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03237 126 Gene3D - 84 113 - -
Vimu11g03237 126 Gene3D - 3 83 - -
Vimu11g03237 126 Pfam Alcohol dehydrogenase GroES-like domain 3 34 IPR013154 -
Vimu11g03237 126 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 114 IPR044626 GO:0016628
Vimu11g03237 126 SUPERFAMILY GroES-like 3 97 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03237 Vimu-Chr11 52288205 52290467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03237 K18980 - gmx:100780585 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03237 11 52288205 52290467 Vimu11g03237 11 52288205 52290467 ECH