Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03214 ATGTCGAATGCGATTGAATATAAAGCAAACTATCATGTTCAGATCTGTCTCAGATATCGAATGGCGGAGAACAAGGACCTCGAAGCCGCCATCAGAAGGTTCGCCTCTGTCAAGAATCACCTCCTTTCCGCCCCCGCAGCGTCCCCTGAACTTACCTTGGCCCGCACTTCCACTACAAACAACAGCTTCGGCCGCGTTCACGGCCACGTCCCCTCTCACGACGTCGTTTGGAGGACCGCTTCCGATGACTTCACAGACATTGTCTACGAGAAGGCCGTTGGGGAAGGAATTGCCAAGATAAGTATTAATAGGCCAGAGAGAAGGAACGCGTTCCGTCCCAAAACGGTGAAGGAGCTCATGAGTGCTTTCACTGACGCCAGGGATGATTCATCTATTGGGGTCGTCATTCTCACTGGCAAGGGCACCAAGGCATTTTGTAGTGGTGGTGACCAGGCTTTGAGGACTGACGATGGCTATTCTGATGATGGAAGTTTTAGCAACCTTAATGTGTTAGACTTGCAGCCATTCATCTCAGTGAACCATGAGTCTTCAACTTCTATTGTGTGGTTCCCATTATTTGTGCAGATACGCCGCCTCCCTAAGCCAGTGATTGCAATGGTAGCAGGTTATGCTGTTGGTGGAGGGCATATATTACATATGGTCTGTGATCTAACTATTGCAGCAGATAATGCTATCTTTGGCCAAACTGGTCCTAAGGTAGGAAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCTCGTTTGGTAGGTCCAAAAAAAGCGCGTGAAATGTGGTTCCTCACAAGGCTCTATGATGCTGTTGAAGCAGAGAAAATGGGCCTTGTCAACACTGTTGTACCTCTTGAGAATTTGGAGATAGAAACGATAAAATGGTGTCGGGAGATACTGAGTAACAGTCCAACTGCTATTCGGGTGCTCAAGTCTGCTCTTAATGCAGTGGATGATGGACATTCTGGACTTCAGGAACTCGGGGGAAATGCAACACTGATATACTATGGCACGGAGGAAGCTAAAGAAGGGAAGACTGCATATTTGCAACGTAGACGCCCTGATTTTTCTAAGTTCAAACGGCGACCTTAA 1101 0.475 MSNAIEYKANYHVQICLRYRMAENKDLEAAIRRFASVKNHLLSAPAASPELTLARTSTTNNSFGRVHGHVPSHDVVWRTASDDFTDIVYEKAVGEGIAKISINRPERRNAFRPKTVKELMSAFTDARDDSSIGVVILTGKGTKAFCSGGDQALRTDDGYSDDGSFSNLNVLDLQPFISVNHESSTSIVWFPLFVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRLYDAVEAEKMGLVNTVVPLENLEIETIKWCREILSNSPTAIRVLKSALNAVDDGHSGLQELGGNATLIYYGTEEAKEGKTAYLQRRRPDFSKFKRRP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03214 366 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 77 365 IPR010198 GO:0008935|GO:0009234
Vimu11g03214 366 Gene3D - 306 354 IPR014748 -
Vimu11g03214 366 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 22 366 - -
Vimu11g03214 366 SUPERFAMILY ClpP/crotonase 73 361 IPR029045 -
Vimu11g03214 366 CDD crotonase-like 87 302 - -
Vimu11g03214 366 Gene3D - 73 305 - -
Vimu11g03214 366 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 204 224 IPR018376 GO:0003824
Vimu11g03214 366 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 304 354 - -
Vimu11g03214 366 Pfam Enoyl-CoA hydratase/isomerase 95 172 IPR001753 -
Vimu11g03214 366 Pfam Enoyl-CoA hydratase/isomerase 180 360 IPR001753 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03214 21 366 Acyl Lipid Metabolism Gene Families AT1G60550 69.944 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03214 K01661 - gmx:100782743 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03214 11 51906993 51910396 Vimu11g03214 11 51906993 51910396 ECH