Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03199 ATGAGTTTCTTATCATGGCCTTCTAGCCACTCATGGCAACCCACCAAGAGTTTAGACACCACTGCCTTAAGTTATTGGTTGAATTGGAGGTTCTTATTTTGTGCTCTATGGATTTTAGGATCCATGGCTCTGTCATTTTTCTTGATATTCAAGTATGAAGGATTCAATAAATCAAGATCAAACAGTGGAGAAAGTGAAGGAGAAGAAGCTGAATTGTTACATGAGGATGAGGCATGGAATACCTGTCTAATAGGAATTGATCCTTCATGGCTGCTAATTTATAGAGTAATTTGTTTTATTGTGCTTTTGGCTTTGGTCATTGCCAGTGTTGCTGCAGACGGAGCAGTCATATTTTACTTCTACACTCAATGGACCTTTACATTGGTGACTATTTACTTTGGGCTTGGATCATATTTCTCCTTATATGGATGTTCCCTGAAACAAGACAAAATCACAGTGAATGATGCAGAAGTTGGCATTGTTACCCATGATAGAAAAATTGCTTCTTTATGGGGTTACGTTTTTCAAATTATATTTCAGACTTGTGCAGGTGCTGTAGTGTTAACGGATTCAGTATTCTGGTTTATCCTTTATCCTCGTCTGAGCTCCTCCAAAGATTATAGTGTTGATTTTTTGGTTTTTTGTATGCACTCAATTAATGCGCTTTTCCTCCTCGGTGACACGTCATTGAATTGCATGAGATTTCCAATGTTTCGATTTGCATATTTTGTGTTGTGGACGGCTACTTTTGTGATTTTTCAGTGGATCATTCACGTTTGCGTTTCACTTTGGTGGCCTTATCCTTTTCTTGATCTATCCTCTCCCTATGCACCCTTATGGTACTTGGCTGTGGCTTTGATGCACTTTCCATGCTATGGCGTCTTTGTTTTAATAATAAGGATGAAGCACTTTTGGCTATCAAGATCATTTCCTGCCTCTTCCCGCTTTATTAAGTGA 957 0.3866 MSFLSWPSSHSWQPTKSLDTTALSYWLNWRFLFCALWILGSMALSFFLIFKYEGFNKSRSNSGESEGEEAELLHEDEAWNTCLIGIDPSWLLIYRVICFIVLLALVIASVAADGAVIFYFYTQWTFTLVTIYFGLGSYFSLYGCSLKQDKITVNDAEVGIVTHDRKIASLWGYVFQIIFQTCAGAVVLTDSVFWFILYPRLSSSKDYSVDFLVFCMHSINALFLLGDTSLNCMRFPMFRFAYFVLWTATFVIFQWIIHVCVSLWWPYPFLDLSSPYAPLWYLAVALMHFPCYGVFVLIIRMKHFWLSRSFPASSRFIK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03199 318 PANTHER UNCHARACTERIZED 40 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03199 Vimu-Chr11 51486563 51489165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03199 - - var:108338653 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03199 11 51486563 51489165 Vimu11g03199 11 51486563 51489165 ECH
Vimu11g03199 11 51486563 51489165 Vimu7g00656 7 6573842 6576096 ECH
Vimu11g03199 11 51486563 51489165 Vimu10g01259 10 12715116 12717803 ECH
Vimu11g03199 11 51486563 51489165 Vimu11g03199 11 51486563 51489165 PCT