Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03164 TTGACTCGCTCTACTTCCTTCGTCATGAGAGAGCCTAGAGATGAAGCCAGCAAGCCCTCCAAAAACTCATCCTCGGGTACCTCCTTCCCTCTCATTCTCGACATCGAAGATTTCAAGGGAGACTTCTCGTTTGACGAGTTGTTTGGGAACCTCGTGGGCGAGCTTCTTCCGGCGTTCAAATCGGAGGATGCGGAAGGGGACGGCGGCGATTCCCAGGCGAACGGGCATCGCCGAGTGCCGTCCGATGCGGCCAAGTACTCCTCGCAGGTAGTTGCGAGTCCGTTGTTCCCCGAGGTTGAGAAGCTCTTGTCGTTGTTCAAGGATTCTTGCAAGGAGCTGCTTGAGCTTCGTAAACAGATTGATGGGAGACTCTACAATCTTAAGAAAGAAGTCTCAGTTCAAGACTCTAAGCATCGAAAGACACTTTCTGAGCTAGAGAAAGGTGTAGATGGATTGTTTGATAGCTTTGCCAGGTTAGATTCGCGAATTTCAAGTGTTGGCCAGACAGCTGCAAAGATAGGTGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAAACAATTGAGTTGATAAAATATTTAATGGAGTTCAACAGCAGCCCAGGTGATCTGATGGAGCTTTCACCTCTTTTTTCTGATGATAGCCGTGTTGCCGAGGCTGCTTCGATTGCCCAGAAATTACGGTCATTTGCTGAAGAAGATATTGGAAGACATGGAATACCTGTCCCATCAACTATGGGAAATGCAACTGCTAGCAGAGGATTAGAAGTTGCAGTTGCTAATTTGCAGGAATACTGCAATGAACTGGAGAATAGATTGCTCTCTCGGTTTGATGCAGCATCACAGAAAAGAGAATTGACCACCATGGCCGAGTGTGCCAAAATTTTGTCTCAGTTCAACAGGGGTACAAGTGCCATGCAACATTATGTGGCAACACGGCCAATGTTTATTGATGTTGAAGTGATGAATGCAGACACTAAGCTAGTTCTAGGTGAACAGGGTGCCCAAGGGAGCCCTAATAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTTAGAAAAGAGGCTGCAACGATCACAGCTGTATTCCCCACACCAAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTCTAGAGCAGCGAATCACTGCCCTTTTAGACAAACTGTTAGAGAAGCCATCTCTTGTTAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTATATCTTCGAATGCTGGCAGTGGCATATGAAAAGACCCGAGAACTAGCAAGAGATCTACAAGCTGTAGGATGTGGTGACTTGGATGTTGAGGGTCTAACCGAGTCCCTATTTTCAAGCCACAAGGATGAATATCCTGAATATGAGCAGGCATCTCTTAGGCAATTATATAAAGTGAAGGTGGAAGAATTGCGAGCCGAAAGTATGCAGATATCTGATTCATCTGGGTCAATTGGACGTGCAAAAGGAGCTTCAGTAGTTTCTTCTCAACAGCAAATATCTGTTACAGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTATTTGCTTCCCAGCCTGCAACACTTGCAAACAATGTAAAAGCGGTCTTTACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCAGATGGGCTTGAACGGGCTAGAGACGGCCTGACAGAGGCAGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTACCCGTAGAGTGGCCGCTGCAGCTGCCTCTGCTGCAGAGGCTGCTGCTGCTGCTGGTGAAAGTAGTTTCAGATCTTTCATGATTGCTGTACAACGATCTGGAAGCAGTGTAGCTATTATTCAACAATATTTTTCTAATTCTATTTCTCGGCTTTTGCTCCCTGTTGATGGGGCACATGCGGCTGCTTGTGAGGAAATGGCTACAGCAATGTCAAGTGCAGAAGCAGCTGCTTATAAAGGATTGCAACAGTGCATTGAAACTGTCATGGCTGAGGTTAGTTCTACCTATAACATTATGAGTGATAACCAATTGTCAACTGCATTAAACATAATGGCTACTCTCAATCTGCTTACTATCCATCCAATAGAAATGGGCTGGTTCTGGGTGGAGCGGTTGCTTTCAGCTGAACAAAAAGCTACAGATTATCGGTCACCTGATGATGGAATGGCTCCTGATCACCGGGCAACTAGTGCCTGCACAAGAGTTGTTGCTTATCTTTCCCGTGTGCTGGAATCTGCATTTACTGCTCTAGAAGGCCTTAACAAACAAGCATTCCTGACTGAATTGGGGAATCGCCTTCACAAGGTGCTACTAAACCATTGGCAGAAGTATACTTTTAATCCAAGTGGGGGATTGCGACTGAAGCGTGACATTACTGAATATGGAGATTTTTTGCGTAGTTTCAATGCTCCTTCTGTTGATGAAAAGTTTGAATTGTTGGGCATACTGGCCAATGTATTTATTGTTGCTCCTGAGAGCCTTTCGACTTTGTTTGAGGGCACGCCCAGCATACGGAAAGACGCACAAAGGTATAATAATTACATTGTATTTGTAAATAATGCAATGCTTTATGTTTTATTATTTATTCAACTTCGGGATGACTACAAGGCTGCCAAACTTGCGTCCAAACTGAGTTCCTTGTTTTCTTAA 2679 0.4479 MTRSTSFVMREPRDEASKPSKNSSSGTSFPLILDIEDFKGDFSFDELFGNLVGELLPAFKSEDAEGDGGDSQANGHRRVPSDAAKYSSQVVASPLFPEVEKLLSLFKDSCKELLELRKQIDGRLYNLKKEVSVQDSKHRKTLSELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGIPVPSTMGNATASRGLEVAVANLQEYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTKLVLGEQGAQGSPNNVARGLSSLYKEITDTVRKEAATITAVFPTPSEVMSILVQRVLEQRITALLDKLLEKPSLVNLPSMEEGGLLLYLRMLAVAYEKTRELARDLQAVGCGDLDVEGLTESLFSSHKDEYPEYEQASLRQLYKVKVEELRAESMQISDSSGSIGRAKGASVVSSQQQISVTVVTEFVRWNEEAISRCNLFASQPATLANNVKAVFTCLLDQVSQYIADGLERARDGLTEAANLRERFVLGTSVTRRVAAAAASAAEAAAAAGESSFRSFMIAVQRSGSSVAIIQQYFSNSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVSSTYNIMSDNQLSTALNIMATLNLLTIHPIEMGWFWVERLLSAEQKATDYRSPDDGMAPDHRATSACTRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGDFLRSFNAPSVDEKFELLGILANVFIVAPESLSTLFEGTPSIRKDAQRYNNYIVFVNNAMLYVLLFIQLRDDYKAAKLASKLSSLFS 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03164 892 Coils Coil 255 275 - -
Vimu11g03164 892 PANTHER SEC10 31 881 IPR009976 GO:0005737
Vimu11g03164 892 MobiDBLite consensus disorder prediction 1 29 - -
Vimu11g03164 892 MobiDBLite consensus disorder prediction 62 81 - -
Vimu11g03164 892 Pfam Exocyst complex component Sec10 707 886 IPR009976 GO:0005737
Vimu11g03164 892 Pfam Exocyst complex component Sec10 503 677 IPR009976 GO:0005737
Vimu11g03164 892 Pfam Exocyst complex component Sec10 150 482 IPR009976 GO:0005737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03164 K19984 - gmx:100820430 1384.78