Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03159 ATGGCTGAGATCTTGAGAGACTGTAGGCGGCGTGGAAGTTTGAGGTGGAAAGTTCTCCAAAAGGAACAAACAAGTCCAACATTGTTGCTTTCTAGATACACGCACGCGCCTTCTGTCTCTTCTCAACATTACAGATTCAGGCGCCTTTTCAACCGTTCATTCCTTCTTCATCGTCATCATCACAATCACAATCACCCTCCCTTTCCTGCTTCTTCCTCTCTCTCTTCTCACTGTCCGTTTTCCCCCTATCGCTTCTTCTTTTCTACTCCTTTTTCTTCCATGGCTTCTGATTCACCTTTCCCCGTCACTGCTCAAAACATCAACCCAAAGGTCTGTGTTGCCTTCATTTATCTTTTCACTGCCATCACGCTTGTCGTTTTTCGCTTTGTCACTTCTGGGTGTGCTAAAGTTGCAAGCTTTGAACTGTGTGATCGTGTTTTTTTATCTGGGCAAAAGCGTGGTGTCGATTTGATGTTTTTGGGGTTCTCTTTCTTGGTTTTTGCACGCTTTGATCGACCTTTTGATTTAATTATAGCTGTTTTGCCTTTTAAAGGCCTGCGAATTATTATTATTTTTGATCCTTGTTTTCTGTCTAGTGGCGTGACTGATGACCTAGTTATAGGTTTTCGTTTTTCTACTATTATATGCCCAGTTCTGAAATGTGAGTACGCCGTTAGAGGAGAGGTTGTCACACTTGCTCAGAATTTGCAAAAGGATTTACTGGCCAATCCCGGTTCTCATCCATTTGACGAGCTTCTTATGCGCATGGTGTTCATGCAAGGGGTGAACCCACTGTGTAGCGGACAGTCTTATCTTATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGCCTCCAATAACCTTTTTCCGAGAGGTTCTTGCATTAACTGATCATCCAGCTATATTGGACAAAAGTGAAACACAGGGTTTGTTCAGCACTGATGCAATAGAACGAGCTTGGCAGATTGTGGAACAGATTCCCGGTAGAGCAACTGGTGCCTATAGCCACAGTCAGGGTGTCAAGGGTTTGCGTGATACAATAGCTGCTGGCATTGAAGAGCGTGATGGTTTTCCTGCCAATCCTGATGACATTTTCATGACAGATGGTGCAAGCCCTGCAGTCCATAACATGATGCAATTACTTATTAGGTCGGAAAATGATGGTATTTTGTGTCCCATTCCACAGTATCCTCTATACTCAGCTTCTATTGCCCTCCATGGTGGCTTCTTGGTACCTTATTATCTAGATGAAGCAACCGGTTGGGGATTGGAAATACCTGAACTCAAGAAGCAATTGGACGCTGCCAAGTCTAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACGGGGCAGGTTCTTTCTGAGGAAAATCAGCGCAATATAGTAGAGTTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTTTATGTACCTGAGAAGAAATTTCACTCATTCAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGACATCACTTTAGTATCCTTTCAATCAGTCTCCAAAGGCTACCATGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGCTTTTCTGCAGAAGTGAGGGAGCAAATTTATAAAGTGGCATCTGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAATCATTCATGGCTGAGAAGGGAAATATTTTGGCATCGCTTGCTAGGCGTGCAAAGACACTAGAAGATGCATTCAACAAACTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCCCAAATTCGTCTGTCCCAAAAGGCTATCAAAGCTGCAGAGGAGGCAAAAACTGCACCTGATAACTTCTATTGCAAGCGGTTGCTTAATGCCACAGGAGTAGTAGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTCAGATGCACCATTTTGCCCCAAGAAGAAAAGATTCCAGCCATTGTCTCCCGTTTGACAGAGTTCCATGAAAAATTCATGGATGAGTTCCGTGACTAA 2124 0.4369 MAEILRDCRRRGSLRWKVLQKEQTSPTLLLSRYTHAPSVSSQHYRFRRLFNRSFLLHRHHHNHNHPPFPASSSLSSHCPFSPYRFFFSTPFSSMASDSPFPVTAQNINPKVCVAFIYLFTAITLVVFRFVTSGCAKVASFELCDRVFLSGQKRGVDLMFLGFSFLVFARFDRPFDLIIAVLPFKGLRIIIIFDPCFLSSGVTDDLVIGFRFSTIICPVLKCEYAVRGEVVTLAQNLQKDLLANPGSHPFDELLMRMVFMQGVNPLCSGQSYLILYCNIGNPQSLGQPPITFFREVLALTDHPAILDKSETQGLFSTDAIERAWQIVEQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASIALHGGFLVPYYLDEATGWGLEIPELKKQLDAAKSKGINVRALVVINPGNPTGQVLSEENQRNIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESFMAEKGNILASLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAEEAKTAPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRLTEFHEKFMDEFRD 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03159 707 FunFam alanine aminotransferase 2 335 581 - -
Vimu11g03159 707 SUPERFAMILY PLP-dependent transferases 316 697 IPR015424 -
Vimu11g03159 707 CDD AAT_like 320 696 - -
Vimu11g03159 707 PANTHER ALANINE AMINOTRANSFERASE 217 706 IPR045088 GO:0008483
Vimu11g03159 707 Gene3D - 284 334 - -
Vimu11g03159 707 FunFam alanine aminotransferase 1 570 707 - -
Vimu11g03159 707 Pfam Aminotransferase class I and II 331 686 IPR004839 GO:0009058|GO:0030170
Vimu11g03159 707 Gene3D Aspartate Aminotransferase, domain 1 273 705 IPR015422 GO:0003824
Vimu11g03159 707 Coils Coil 593 613 - -
Vimu11g03159 707 Gene3D - 335 581 IPR015421 GO:0003824
Vimu11g03159 707 FunFam Alanine aminotransferase 2 284 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03159 Vimu-Chr11 50959903 50965775 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03159 K00814 - gmx:100127413 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03159 11 50959903 50965775 Vimu11g03159 11 50959903 50965775 ECH