Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03154 ATGATTATCCCATTAGTATATAAAAACCTTTTATTGGTGACTATGCTACACACAATTTCAACAACCATGGGAAAAGTTTGTCCCCAAGCACTAGAATCCTCTACTACCTGCAGTTTCACTTGCAAGCAAGAAACTTTTACCCTATGGATGAAATCTCTTGTACTCAACGGAAAAGGGTGCACTGTCTTTGATTCCAATGGCCAGATTGCATACAGAGTTGATAACTACAACTGCAAGCATAGAGCAGAAGTTCATCTCATGGACCAAAATGGTGATATTTTGTTCACTATGTTAAAAAAGCAATATAAGTTGTCCAGATTCTGGGAGGGTTATAGATTTCCAGCAACAAGAAATGACCATAAAGGACCATGCTTTCGAGTTTCAAAAACTTATAAGATCTCTAAAGGGGGTTCGATCTATGAAGTTGAACTTGGTTTGGACAAAAACCAACCCTATATTCATAAAATAGAAAGCAGCACCTGCAATTCAGCTTGCAAAATATCTAATGAGGTTGGAGTGGTAGTTGCAGAGCTAAGGAGGAAGAAGTCACATAGTGGAGTTGATTTAGGAGATGATGTTTTCACAATGATAGTGGAGCAAAATATAGATCTTTCTCTAGTTATGGGGCTTGTTGTAGCATACAATCTTATAAACTCTAAAATGTAA 666 0.3709 MIIPLVYKNLLLVTMLHTISTTMGKVCPQALESSTTCSFTCKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNCKHRAEVHLMDQNGDILFTMLKKQYKLSRFWEGYRFPATRNDHKGPCFRVSKTYKISKGGSIYEVELGLDKNQPYIHKIESSTCNSACKISNEVGVVVAELRRKKSHSGVDLGDDVFTMIVEQNIDLSLVMGLVVAYNLINSKM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03154 221 PANTHER - 43 217 IPR007612 -
Vimu11g03154 221 Gene3D - 37 221 IPR038595 -
Vimu11g03154 221 Pfam LURP-one-related 41 212 IPR007612 -
Vimu11g03154 221 SUPERFAMILY Tubby C-terminal domain-like 42 218 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03154 Vimu-Chr11 50926072 50928795 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03154 - - gmx:100820270 371.318