Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03149 ATGCTTCCAAAGTTCATCAATATTAGCCCCTTTAAAGTTGAACACCAAGAATTGAAACACATCAACAAAAGAAGAAAGCACGAGAAATCATTTGACATGGATGTTGGTTTGAGACTTCTCCCTCAAATCACCAGCTCAAAGACCACATCAAACGTTCTCTTGAAATCTGCAATGAGAAAGCCAAACCAATATTCCATCCCTCAAGACTTCTGCTTCCTTAAAACTTGCAATCTCTGCAATAAGCAGCTCAGTCCAGACAAAGATATTTACATGTACAGAGGAGATCAAGGTTTCTGCAGTGTAGAGTGCCGCAACAGACAAATAGTTTTGGATGAGATGAAGGAATTAGAAAGCTCTACCAAGCAAATGGTAGCATCTTACAGACAATGTTGCAGTGAGGCACGTCAAGAGACTCGCCTTATACTGAAGGACCTTCGAACGCAGAGACTCAAATCTAGAGTCTGA 465 0.4086 MLPKFINISPFKVEHQELKHINKRRKHEKSFDMDVGLRLLPQITSSKTTSNVLLKSAMRKPNQYSIPQDFCFLKTCNLCNKQLSPDKDIYMYRGDQGFCSVECRNRQIVLDEMKELESSTKQMVASYRQCCSEARQETRLILKDLRTQRLKSRV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03149 154 ProSiteProfiles Zinc finger FLZ-type profile. 71 115 IPR007650 -
Vimu11g03149 154 PANTHER FCS-LIKE ZINC FINGER 17 13 151 IPR044181 -
Vimu11g03149 154 Pfam zinc-finger of the FCS-type, C2-C2 71 114 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03149 Vimu-Chr11 50887126 50887697 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03149 - - vun:114166492 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03149 11 50887126 50887697 Vimu11g03149 11 50887126 50887697 ECH