Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03133 ATGAAGTTCACAGTGTCAAATCTATCAAGCTCTGTGTTCTTCCTCCTCATCTTCTTTGCTTTTGTGTCTCCCATCCATGGAAGCAACAGACATGCTCCTCTCTTCATTTTTGGTGATTCTTTCTTAGATGCTGGCAACAACAATTACATCAACACTACAGCTCTTGACCAAGCAAATTTCTGGCCCTATGGAGAAACATACTTCAACTTCCCAACAGGGAGATTCTCTGATGGAAGGTTGATATCAGATTTCATAGCTGAATATGCAAAGCTGCCATTGGTTCCACCATATTTACAACCTGGCAATAACCAATACTATGGAGGAGTGAATTTTGCATCTGGTGGAGCTGGTGCTCTTGTTGAAACTTTTGAAGGGTCGGTAATACCATTGAAAACACAAGCAAGAAACTACAAGAAAGTTGCAGCTTTTCTGAGGCACAACTTAGGGAAATCCGAAGCTAAGTTATTGTTATCAAACGCTGTCTACATGTTTAGCATCGGAAGCAATGATTATCTTAGCCCGTTCTTGACAGATTCTGATGTTCTTAAATCATACTCTCATTCAGAATATGTTGCTATGGTTCTTCGTAATATGACTTCCATTATCAAGGGAATATACAAGAGAGGGGCTAGGAAATTTGTGTTGATGAACTTGCCACCCTTGGGTTGTCTTCCAGGAACCAGAATAATTGATGTGGAAGAAAATGGAAAATGCTTGCAAGAACTTTCAAACCTTGCAAGTTTACACAATAGAGTTCTACATGTGGTTCTCTTGCAACTGGAGAATAAGTTGAAGGGCTTCAAATTTGCACTGTATGATTTCCACACTCATGTCACTCAAATGATGAACCATCCCTTCAAATATGAAAGTGCTTACAAAAACATAGCAGATCGAATGTGGGGTTTTAGCAACAACTCTTACAATATAGGGCCTTACACTATAAGACATTTCTTCCAACTTCCATGA 966 0.3934 MKFTVSNLSSSVFFLLIFFAFVSPIHGSNRHAPLFIFGDSFLDAGNNNYINTTALDQANFWPYGETYFNFPTGRFSDGRLISDFIAEYAKLPLVPPYLQPGNNQYYGGVNFASGGAGALVETFEGSVIPLKTQARNYKKVAAFLRHNLGKSEAKLLLSNAVYMFSIGSNDYLSPFLTDSDVLKSYSHSEYVAMVLRNMTSIIKGIYKRGARKFVLMNLPPLGCLPGTRIIDVEENGKCLQELSNLASLHNRVLHVVLLQLENKLKGFKFALYDFHTHVTQMMNHPFKYESAYKNIADRMWGFSNNSYNIGPYTIRHFFQLP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03133 321 Gene3D SGNH hydrolase 26 314 IPR036514 -
Vimu11g03133 321 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 15 289 IPR044552 -
Vimu11g03133 321 Pfam GDSL-like Lipase/Acylhydrolase 34 304 IPR001087 GO:0016788
Vimu11g03133 321 SUPERFAMILY SGNH hydrolase 34 243 - -
Vimu11g03133 321 CDD SGNH_plant_lipase_like 34 288 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03133 Vimu-Chr11 50729599 50733909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03133 34 284 Acyl Lipid Metabolism Gene Families AT4G10950 32.171 1.02e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03133 - - vun:114165914 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03133 11 50729599 50733909 Vimu11g03133 11 50729599 50733909 ECH