Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03128 ATGGATTCAAATTCAACAAAGGAGAAGCTGCAGAACACCGATGCTGTTGCAGATGAAGCCGACCTTAAGTCTTGCTATATGCAGAAGTTCAGGCTCTATGAGACTCGCTCGAAATTTTACATGATCGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAACCATCTGAATTGAATATCGTTGAAGATTCAGCAATATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGGTACATGAAGGAAACAAGTCTACAGGAGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAACCATATTACATGCTGCTTATAACGAAGCGAAGGAAGATTGGCACAATCTGTGGTCACAATATATATGCTATCACAAAGAGCGAAATGGTTCCAATTCCACATTCTACCGTGCGATCCAAAATGGCTTATTCTAAGGATGAGAACAGTCTGTATCCACAATGTGGGCTTCTTCAGAGCAACCTTCTCATCTTTCTTTCTGTGGAGCAATCTTCATTGCTGTTATGTAACTTTTTGATTGAGAGAAGATACAAGAAGCTTCTATGCAGTGTGGATCTTGCGAAGGACTTCTTTTTCAGCTACTCCTACAATGTTATGTTTAGTCTTCAACGCAACTTATCTGATCATAATACTACAGGACAATCACTATATGATACCCTTTTTGTTTGGAATGAGTTCTTGACTCGTGGAATCAGGAATAATCTCCAGAATACTTCATGGACTGTAGCCTTAGTACATGGCTTTTTTAAACAGGTCAAACTTTCCATATCAGACAGTGAGTTCAACTTGACTATCATTGCTAGGCGCTCACGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTTAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTACAGAAGCTCGTGATGGACACCCTATGCAAATCAGTTCTGTGGTGCAGAACAGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTAGATTGAATATAAAACCGGACATTATATTATCAAGAAAGGACTCTACTTTTGAGGCCACAAGACTTCATTTTGATAATCTTATCAAAAGATATGGAAAGCCAATTATTATTCTGAATTTGATAAAGACACGTGAGAAGAGGCCTCGAGAAACTATTCTGCGAGCTGAGTTTGCAAATGCTGTTAGGTATATTAATAAAAGTTTGAGAGGGGAAGATCGCTTGAGGTTCCTTCATTGGGATCTGCATCGGCATTCAAGATGCAAAGCTACTAATGTATTGGGACAGCTGGGAAAAGTGGCTGCATATGCGCTGAAGCTGACAGGGATCTTCTACTCTCCAGTGACACCAAATATGAGGCTAGATGGATTATCCCAATATTCCTACTCTGAGGATGATGAGAACAAAGATTACAGTGTCAAACCCCAGATGCTTCAATCCGGGGTGTTGAGGACTAACTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTATGGACTAGCTGCACTTGGACGTCAGCTTCAAGTTCTAGGATTTATTGAATCCCCACATATTGATCTTGACAACCCTTTGGCTGGGGAATTAATGGAAGTCTATGAGTCCATGGGAGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCACACAACAAGATATTTTCTGAAAGAAGAGGTCAATGGAAGGCAGCAACACAGTCCCAGGAATTTATTCGAACCCTACAACGTTATTACAATAACACATATGTAGATGGTGATAAACAAAAAGCAATTAACTTATTCTTGGGTCATTTTCAGCCGCAACAGGGAAAACCAGCACTGTGGGAGCTTGATTCAGATCAGCATTACGCTGTCAAGAGACATGGCCTTTATTTAACAGATGGCAGCGTTAGGTCAACTATTACGAGATCTCTATCAGATGGTAACATTCTAGGTGAAAGTGATGCTTCCATTAGGAACTTGAATGATACAAATTGTCAGAAATCATCTGAAAAACCTGATAAGCATTTCCGCTCGGGATCTACGCCTGATATCTTTGTTTGTGGAAGTGATATTTGTCATTGCAGGCAGATATACGGAGGAGTGGTGAAGGGTAAAAATTGTGAGAGTGGTCATATTTGTTACGATGAACATGGTGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCCTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCGGAGAATATCGCAAATGAACTAGTAACCACTGAAACATCTGCTAGTGAATCTGGATCCAGCCTTAAGTACATTCTTGTCTTGCATGAAGCCAAGTGGTGGCTAAAATCTGCATTGAATGTATTTCAGGGAAGGCAGAGTGCAGAAGAACTGAACAAAGATAGGAAGTACAGTGAAACGTTTGAACGTTGGGTAAATGAAGAAGAGATGCATTTTGCTTGGAGAATATAG 2514 0.4053 MDSNSTKEKLQNTDAVADEADLKSCYMQKFRLYETRSKFYMIGRDKNRTFWRVLKIDRLEPSELNIVEDSAIYSEIECCDLLRRVHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHNIYAITKSEMVPIPHSTVRSKMAYSKDENSLYPQCGLLQSNLLIFLSVEQSSLLLCNFLIERRYKKLLCSVDLAKDFFFSYSYNVMFSLQRNLSDHNTTGQSLYDTLFVWNEFLTRGIRNNLQNTSWTVALVHGFFKQVKLSISDSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTEARDGHPMQISSVVQNRGSIPLFWSQEASRLNIKPDIILSRKDSTFEATRLHFDNLIKRYGKPIIILNLIKTREKRPRETILRAEFANAVRYINKSLRGEDRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYSPVTPNMRLDGLSQYSYSEDDENKDYSVKPQMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGRQLQVLGFIESPHIDLDNPLAGELMEVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYVDGDKQKAINLFLGHFQPQQGKPALWELDSDQHYAVKRHGLYLTDGSVRSTITRSLSDGNILGESDASIRNLNDTNCQKSSEKPDKHFRSGSTPDIFVCGSDICHCRQIYGGVVKGKNCESGHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENIANELVTTETSASESGSSLKYILVLHEAKWWLKSALNVFQGRQSAEELNKDRKYSETFERWVNEEEMHFAWRI 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03128 837 ProSiteProfiles Sac phosphatase domain profile. 199 562 IPR002013 GO:0016791
Vimu11g03128 837 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 15 684 IPR043573 GO:0043813|GO:0046856
Vimu11g03128 837 Pfam SacI homology domain 102 433 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03128 Vimu-Chr11 50684001 50694359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03128 27 782 Acyl Lipid Metabolism Gene Families AT5G20840 54.647 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03128 K22913 - gmx:100796788 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03128 11 50684001 50694359 Vimu11g03128 11 50684001 50694359 ECH