Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03125 ATGGTGAAATTGAAGTCCAGCAAGTCAAACAAATCAGAAGATGTTGAAATCCTCAAATCAGACATTGCCTCCTTCGCTTCCTCGCTTGGGTTATCCACATCACACTCCCACTCAGGTTTCAACGATGTCGATTTCCGCAAAACTAAGACGAACAAGCCCCCAAAGAAGCAGCAACCACCTGAAAAAGCCACACCCCAAAGCACCCAGAAGCCAAAGAACAAAACATTGAGCAAAAACAATGGACCCCACCAGAAGAGCAACCCCAAATCCGAACCCAAACCGAAACCCCCAGTTCTGTCACTGGAGAATGGTTCCAGTACGGAAAAGGGGTTCAACAAGTTCAGGAATCTGCCTAAGCTTCCTTTGATGAAAGCAAGTGGTTTGGGAGTGTGGTTTGAGGACATGGCGGAGTTGCAAAGGAAGGTGATTGAGGAAGGGAAGAGGGTGGAGTTAACGGATGTGGAAGGGGGGAGAGGGTTCGTGGAGAAGAAGAGGGAGTTGGGGGAGAGATTGATGGCACAGTATGCTAATGATTATGAGTCATCAAGGGGGAAAAGTGGTGATATTAGGATGTTGGTTTCAACGCAGAGATCCGGGACTGCTGCTGATAAAGTGTCTGCTTTTGCTGTGTTGGTGGGGGATAATCCAATGGCAAATTTGCGTTCTCTTGACGCTCTTTTGGGAATGGTGACATCCAAAGTTGGGAAGAGGCATGCCTTGACAGGTTTTGAAGCACTGCAAGAATTATTTATTGCAAGCTTATTACCAGATCGTAAATTGAAGACCTTGATTCAGCAACCCCTAAATCATCTTCCTGAAACTAAAGATGGTTACTCTCTTCTCCTTTTCTGGTATTGGGAGGAGTGTTTGAAGCAGAGGTATGAGCGTTTTGTTGTTGCCCTTGAAGAAGCATCACGTGACATGCTACCAGCTCTAAAACACAAGGCATTAAAGGCCATATATGTGCTACTGAGTCGGAAGTCAGAGCAAGAACGCAAACTACTTTCTGCACTTGTTAATAAACTTGGGGATCCAGATAATAAAGCAGCATCTAATGCTGACTTTCATTTATCCAACCTTTTGTCTGACCACCCAAACATGAAGGCTGTGGTTATTGACGAGGTGGATTCTTTTCTTTTCCGGCCTCATTTAGGACCACGATCACAGTACCATGCTATTAATTTCTTGAGCCAAATCCGCCTAACAAATAAAGGAGATGGACCTAAAGTGGCAAAACGTCTTATAGATGTATATTTTGCATTGTTTAAGGTTTTAATCACAAACGCAACCAGTAACCAGAAGCTTGATAAAAGCGGCAAGGGCAAGGGAAAGGGAAATGCAAAAGAGGACAAGTCAAAAGAGTTATCAGAATCACATGTTGAATTGGACTCCAGGCTTTTATCAGTTCTCCTAACGGGTGTGAATAGAGCATTTCCTTTTGTCTCAAGTAATGAAGCTGATGACATTGTTGATGTCCAAACTCCAGTACTTTTCCAACTGTATGTTACAGATGATTGCATTGATATTCATCATTACCTCGATATCTTAAGGTTTAAGGCAGAAATGTTTATTGCACTTCTCCTCCGAGCAATGAAAAAGGATGTTAATTTAAAGCGTGTAGCAGCATTTTCTAAACGTCTATTGCAGATTGCACTTCAGCAGCCACCACAATATGCCTGTGCTTGTCTTTTCCTTCTGTCCGAACTTCTTAAAGCCAGACCACCTTTATGGTAA 1734 0.4319 MVKLKSSKSNKSEDVEILKSDIASFASSLGLSTSHSHSGFNDVDFRKTKTNKPPKKQQPPEKATPQSTQKPKNKTLSKNNGPHQKSNPKSEPKPKPPVLSLENGSSTEKGFNKFRNLPKLPLMKASGLGVWFEDMAELQRKVIEEGKRVELTDVEGGRGFVEKKRELGERLMAQYANDYESSRGKSGDIRMLVSTQRSGTAADKVSAFAVLVGDNPMANLRSLDALLGMVTSKVGKRHALTGFEALQELFIASLLPDRKLKTLIQQPLNHLPETKDGYSLLLFWYWEECLKQRYERFVVALEEASRDMLPALKHKALKAIYVLLSRKSEQERKLLSALVNKLGDPDNKAASNADFHLSNLLSDHPNMKAVVIDEVDSFLFRPHLGPRSQYHAINFLSQIRLTNKGDGPKVAKRLIDVYFALFKVLITNATSNQKLDKSGKGKGKGNAKEDKSKELSESHVELDSRLLSVLLTGVNRAFPFVSSNEADDIVDVQTPVLFQLYVTDDCIDIHHYLDILRFKAEMFIALLLRAMKKDVNLKRVAAFSKRLLQIALQQPPQYACACLFLLSELLKARPPLW 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03125 577 MobiDBLite consensus disorder prediction 61 87 - -
Vimu11g03125 577 Pfam CBF/Mak21 family 433 577 IPR005612 -
Vimu11g03125 577 SUPERFAMILY ARM repeat 291 571 IPR016024 -
Vimu11g03125 577 MobiDBLite consensus disorder prediction 437 456 - -
Vimu11g03125 577 MobiDBLite consensus disorder prediction 434 456 - -
Vimu11g03125 577 PANTHER CCAAT-BINDING FACTOR-RELATED 519 577 IPR040155 -
Vimu11g03125 577 MobiDBLite consensus disorder prediction 40 56 - -
Vimu11g03125 577 MobiDBLite consensus disorder prediction 30 113 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03125 K14832 - gmx:100814566 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03125 11 50665780 50670376 Vimu11g03125 11 50665780 50670376 ECH