Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03097 ATGTGTGGGGTCTCTGTTCTGGCGTTTCTGCTTCTGCTGTCTCTCAGTGCGGAAGCTTCTGTTCACGACTACAGAGGGGAGAAATTCACGGCCAAAGGCAACGCCTTTGTAGTCCATGGAGGTAGCGAAGGAATTTACGCTTCTGTCCCCAATTTCACCGACGCTTACCCACCGGCAAATCCTGATTCCTTCATACGATTGGAAAGGATTACATTTAGGAGAAACAAGGAGTTTTCTAACTTCAGTTCATGGCCGATTCAAGCTGTTCTTTTTGAAGTTGAAGATAGAGAGACAATTGGTGGTTCAGCTTATGGGGGCCAAAGGGCTGTCTGCTGCACCGGTGATCTAGCAAAACTCGGTGTGTGTGCTGAAGGGCAAGTGATTTACCGCCCTTCTGTAGAGAATCCTGATTGGCCTCAAGTTTTTGGTGTCTCTTTTGAAATGGATGCTGAAGTGGCAGTGCTGCCATTAAAATCTATACAAATCACAAAAACAGGGATGTATAACTTATATTTCATCCATTGTGATACTAGGCTTAAAGAATTGGTTGTGGAAGGGAAAACTGTATGGAAAAATCCCTCTGGTTATCTGCCCGGTAGAATGGCACCTATGAAAATTTTCTACCAATTTATGTCCTTTGCATATGTATTGCTTGGGATCTTTTGGTTCTCTCAATATGCTAGATTTTGGAGGGAAGTATTTCCCCTGCAGAACTGCATTACCCTGGTGATAACCCTAGGCATGTTTGAGATGGCTCTGTGGTACTTTGACTATGCTGAATTCAGTGAGACTGGAATCAGGCCAACTGGGACAACAATCTGGGCAGTAACCTTTGGAACTGTCAAGCGGACAGTGGCACGTTTGGTCATTTTAATGGTTTCAATGGGCTATGGTGTTGTAAGACCTTCACTAGGAGGGCTTACATCAAAGGTGGTTATGCTTGGAGGAACCTTCTTTGTGGCATCTGAAGTGCTTGAGTTGGTAGAAAATGTTGGTGCAGTAAGTGATCTTTCTGGAAAGGCAAAACTATTCTTAGTTCTTCCGGCTGCAGTGTTGGATGTGTTCTTCATTCTTTGGATTTTCACTTCACTCTCTGCAACTTTAAATAAGCTTCAGGCCAGAAGGATGATGGTAAAATTAGATATTTACAGGAAGTTCACTAATGCTTTGGCAGCAGCTGTGATTGTATCCGTTGGCTGGATTTGTTATGAGCTTTATTTCAAATCAAATGATGTATACAATGAGCAGTGGCGGAATGCATGGATCATCCCAGCCTTCTGGCAAGTTCTGTCTTACTCTCTCCTCTGTATTATCTGCATTCTTTGGGCACCATCTCAAAGTGCAACACGATATGCTTACCGTGATGATGGGAGCGAGGAGTTTGATAGGGATGAGACTACTTTAACGCTGATAAAACCATCAGCCATTTCTTCAAAAGATGTTCGAAGTGTGCCAGATGCTATACCAGTGCAAAGCAGTAACGGGAATTCAAATGATGATTTAGAAGAAGACAAGAGAGAATGA 1524 0.4324 MCGVSVLAFLLLLSLSAEASVHDYRGEKFTAKGNAFVVHGGSEGIYASVPNFTDAYPPANPDSFIRLERITFRRNKEFSNFSSWPIQAVLFEVEDRETIGGSAYGGQRAVCCTGDLAKLGVCAEGQVIYRPSVENPDWPQVFGVSFEMDAEVAVLPLKSIQITKTGMYNLYFIHCDTRLKELVVEGKTVWKNPSGYLPGRMAPMKIFYQFMSFAYVLLGIFWFSQYARFWREVFPLQNCITLVITLGMFEMALWYFDYAEFSETGIRPTGTTIWAVTFGTVKRTVARLVILMVSMGYGVVRPSLGGLTSKVVMLGGTFFVASEVLELVENVGAVSDLSGKAKLFLVLPAAVLDVFFILWIFTSLSATLNKLQARRMMVKLDIYRKFTNALAAAVIVSVGWICYELYFKSNDVYNEQWRNAWIIPAFWQVLSYSLLCIICILWAPSQSATRYAYRDDGSEEFDRDETTLTLIKPSAISSKDVRSVPDAIPVQSSNGNSNDDLEEDKRE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03097 507 MobiDBLite consensus disorder prediction 478 507 - -
Vimu11g03097 507 Pfam Lung seven transmembrane receptor 162 447 IPR009637 GO:0016020
Vimu11g03097 507 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 7 479 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03097 Vimu-Chr11 50449621 50452846 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03097 - - gmx:100806912 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03097 11 50449621 50452846 Vimu11g03097 11 50449621 50452846 ECH