Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03089 TTGTCACAGTTTTCTGTTGTGAATCCGTTTGTAATGATTATTTTCTCCCTTTGCGATTTTTGTTGTTATAGGGATAGTAAAATCATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCCCTTCTGTATTACACATTGAATCGGAAATTGCAAACTCAGGATGCGATAGATGAAGATGTTGAAGAAAATGGAAGTGAAACGACCACTGATACGCCATTAGGCAGTGCTCGTGTTTCTCATCCGTTAATCCAAGCTCCTGGAACCTGGTTAGAGACAATTTCAACGTTGTCTGAGACTCTCAGGTTCACGTATTCGGAGACGCTTGGGAAATGGCCAATTGGGGACTTGGCGTTTGGTATCAGCTTTCTGCTCAAGAGGCAGGGGAACTATCAAGTTGACAGTGAATTCTGTGGGAAGGATAGTGTACAGCTGAAAGGATCTGAGATTACTGCCGAACTTAAGTATCTCTTGAACTTGTTGACCCTGTGCTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGAAGAAACTGGCTACACTGAAGAAAATGTTCTCCTTCGGGAAGCCAAAGCAGGAATTTTGAAACCAGCTTTTACAATAATCGTTGATCATGACCTGAGATGCCTTTTACTGTTGATTCGTGGCACACATAGTATCAAAGATACTCTAACAGCTGTTACAGGAAATGTGGTACCATTCCATCACACTGTTGTTCACCAAGGTGGGGTTAGAGATTTGGTTTTAGGTTATGCCCACTGTGGAATGGTTGCTGCTGCTAGATGGATTTCAAAGCTTGCTACTCCTTGTCTCCTTGAAGCACTTGGCCACTACCCTGATTATAAAGTCAAGATTGTCGGGCACTCTTTGGGTGGAGGTACTGCAGCAATTCTAACATATGTGTTGAGAGAGAGAAAGGAACTGTCTGTCGCTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCGGGTGATAGTTTTATCACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTAGATGACTTGCGTTCTGAGGTGACAGCATCAGCGTGGATAAATGACTTGAGGAATCAAATTGAACAGACAAGAATACTTAGTACAGTCTATCGCTCTGCTTCAGCATTAGGTTCTCGACTCCCATCGATTGCCACTGCTAGAGCAAAAGTTGCTGGGGCTGGGGCCATTTTGCAGCCAGTTTCTAATGGTACCCAGGTACTTTTACCTTCTGTTATAAATCTTTTCAATTTTCGTTCATCATGCAACTATAAGAGATCACACAATTTTTATGCTTTGGATCATAAGCCTAACCAGGACGAGTTTGTACTTGTTAGTTCTCTTCTATCTATGGTTGTGATGAAGAGAGCCAAGAGTATGGCAGCATGGGCACGTCCAAACCTTAATTTGTCCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCTTGAGTGCTTATTCAAACTCCAAAGACGGGGATAGTCCTCCTACATCTTCCTCTACCAATATTGACGGTTCCGATTCACTTCTTCGTTCTCCCAAGAAGGCGATAAATGCAAAGAATATGAACCTTCCTGTATCTTCATCTATAGAAGAGTGGTCTTCGGAGATTGAATGTGGCAATGAAAGTAGTTCTGATACTGAGGTGGATGTTGATCATGGTGACCGTCAGAACCTGATGGACCATGACAGATATGATGATCAGATGAGTGAAGTGGAGTTGTGGCATCAACTGGAGAATGAGCTGTATGACGGTCCTGAAGTTGAGGAGACTGATGTTGTAAAGGAGATAAGGGAAGAGGAAGCAACCCACGAAGTAGAGGAAGCCCAGAGTTCAGTACCAGAAACGAAAGAAGTCTACAGATTTTTCCCTCCAGGAAAGATAATGCACATTGTTACACTCCATTCTGACACGGAGCATGAAAATGATGATAGCCCAACCTATGCAAGTTCAGACAGTAGCGAGCTAGATGAGACTAAGATTGGGATTTTTCTAACTTCCAGGTCTCTGTATAGTAAACTTAGACTCTCACAGAGAATGATCAGTGATCACTTCATGCCAGTTTATAGAAGGCAGATTGAAAGGCTAATAAAAGAACTTGAGCAGGAAGCTACTGAGGACCACGATACACAAGGGGTGGTGTTATAG 2187 0.4335 MSQFSVVNPFVMIIFSLCDFCCYRDSKIMATATMATAAGAAALLYYTLNRKLQTQDAIDEDVEENGSETTTDTPLGSARVSHPLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYQVDSEFCGKDSVQLKGSEITAELKYLLNLLTLCWHFSKKPFPLFLEETGYTEENVLLREAKAGILKPAFTIIVDHDLRCLLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVRDLVLGYAHCGMVAAARWISKLATPCLLEALGHYPDYKVKIVGHSLGGGTAAILTYVLRERKELSVATCVTFAPAACMTWELAESGDSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVLLPSVINLFNFRSSCNYKRSHNFYALDHKPNQDEFVLVSSLLSMVVMKRAKSMAAWARPNLNLSSWSCMGPRRRALSAYSNSKDGDSPPTSSSTNIDGSDSLLRSPKKAINAKNMNLPVSSSIEEWSSEIECGNESSSDTEVDVDHGDRQNLMDHDRYDDQMSEVELWHQLENELYDGPEVEETDVVKEIREEEATHEVEEAQSSVPETKEVYRFFPPGKIMHIVTLHSDTEHENDDSPTYASSDSSELDETKIGIFLTSRSLYSKLRLSQRMISDHFMPVYRRQIERLIKELEQEATEDHDTQGVVL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03089 728 CDD Lipase_3 205 350 - -
Vimu11g03089 728 Pfam Lipase 3 N-terminal region 79 158 IPR005592 GO:0016042
Vimu11g03089 728 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 34 718 - -
Vimu11g03089 728 MobiDBLite consensus disorder prediction 500 521 - -
Vimu11g03089 728 Pfam Lipase (class 3) 214 351 IPR002921 GO:0006629
Vimu11g03089 728 Gene3D alpha/beta hydrolase 176 387 IPR029058 -
Vimu11g03089 728 SUPERFAMILY alpha/beta-Hydrolases 174 351 IPR029058 -
Vimu11g03089 728 Coils Coil 699 723 - -
Vimu11g03089 728 MobiDBLite consensus disorder prediction 498 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03089 Vimu-Chr11 50391417 50396542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03089 43 716 Acyl Lipid Metabolism Gene Families AT3G14075 60.029 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03089 - - gsj:114390808 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03089 11 50391417 50396542 Vimu11g03089 11 50391417 50396542 ECH