Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03055 GGTGGGTTGCGTTTTGAGGTGGAGAAGGTGATAGGGAGGGAGACTGTGATCGATTCTACAGCCTTCCATCTTCCTTCAATTCAACTCAGCTCTCTGCACCTTCCCCTGCGCGCCCATGACCGCATCATAGCGCCGATCAATCCATCACATCAAAATCAATGGCGGAAAGCGCATCACCGTCGTCCAAACCCTCACCAATGGATCCTCAAAACCCCGCACCATCCTCCAACCCTACAATCCCTTCCCCTTCCCACAACAACACAGCTTCATCCTCGCTCCCTCTGCTCCCCCAAGACCAGCAACAGCAACAACAGTTTAACTCGCTCTCCTCGAAAACCTGTTATTGTCGATGGTTGTTCAAAGAGGAGAAACAGGGATAATTGTGAAGGAAGCCCATCACATAACAGTGAACTGAGGACAATGTCTGCTGAATCGCCAAGTTCTGTTCGTAAAGTGGTTGTTCATCTCAGAGCCACCGGTGATGCTCCTATTCTCAAGCAATCCAAGTTCAAGATAGCAGGAACTGATAAATTCGTTAAAGTGATAGACTTTCTCCGACGGCAGCTCCACAGGGAGACATTGTTTGTTTATGTCAATAGTGCTTTTTCACCAAACCCCGATGAATTGGTCATTGATCTATTTAATGTAAGATATCACCTGATCCCATTTTTTCCACTGATTTTTATATCTTCATTGAATGTAGATCATGCAGATTTATGA 720 0.4611 GGLRFEVEKVIGRETVIDSTAFHLPSIQLSSLHLPLRAHDRIIAPINPSHQNQWRKAHHRRPNPHQWILKTPHHPPTLQSLPLPTTTQLHPRSLCSPKTSNSNNSLTRSPRKPVIVDGCSKRRNRDNCEGSPSHNSELRTMSAESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFVKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNVRYHLIPFFPLIFISSLNVDHADL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03055 239 PANTHER AUTOPHAGY PROTEIN 12 141 216 IPR007242 GO:0000045|GO:0005737
Vimu11g03055 239 MobiDBLite consensus disorder prediction 115 132 - -
Vimu11g03055 239 MobiDBLite consensus disorder prediction 84 144 - -
Vimu11g03055 239 SUPERFAMILY Ubiquitin-like 150 216 IPR029071 -
Vimu11g03055 239 CDD Ubl_ATG12 151 221 - -
Vimu11g03055 239 MobiDBLite consensus disorder prediction 84 110 - -
Vimu11g03055 239 Pfam Ubiquitin-like autophagy protein Apg12 151 215 IPR007242 GO:0000045|GO:0005737
Vimu11g03055 239 Gene3D - 139 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03055 Vimu-Chr11 50111728 50117034 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03055 K08336 - gmx:100527733 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03055 11 50111728 50117034 Vimu11g03055 11 50111728 50117034 ECH