Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03050 ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCGCCTGCAGATGATAATGATGATAGAGATGGTATTGTCTGCATCCAGCCCCAAAAGACACACCCATCGACTAATCCCCATGCTTCTGATTTATTTGCAACATCAACTGCATCCCAAGGAATAATAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCCACTGGTGTGCCTGAATCAGATGCTGAATTGAAGAGAGCAGGAGATCAGGACACAAAGGTTTCCTCAAAGTCAAGTAAAGATGAAGATGTGAAGGTTATAGATTCACGGATTCAAAGTTCAACAAATGCCCAACCTACTGAGAGGGAAGAAGGGGAATGGTCTGATGAGGACGTGTTTGCTAATGCAAATGGAGGTAATAATGCTAATGCAAATGGAGGTAGTAATGCTAATGCAAATGTAGGGAATAATTTGCCACAGCGAAGTCAAGCTGCAGAAGAGGTAGCAGAATCTGGAATGGTGGATGGGGGTGTTGTGGTTGCTTTTGACGATAAGCCTAGAAATCTCAAGAGTTCTGATAGTATAAATGATGAAAAGGGTAGTCATGCTTCTATAGGTCTAGAATCAAATTCGAGTGAGCAGAAAAGCAATAGTATTCCAAATTCAGAAAGCAATATAAAAAGCGAAACCTCTACTGATGCACTGGAGGAACCTGCTTTAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCGCTTAGGTGTGCAAATAATCCAGGGAAGAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGTAATAGACAGACAGTGTTTCTTAACTTAGAGGATGTTAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAGAATTTCTCGTCATCTGTTGTAAGTCGTACAATAAAGGAAGTCCGCACTATTCCTGCACAAATTGAGCGTGTTGGAATAGCTAAGGATCAGAAGCTCACTGAGACTACTTCTGGTGAAGGTGGCAACCATGCTGAAGCACACGAACCTAAATCTGATTGTAATGGCGATACTACTGGACCACTTGTTAGATCCAGGAGGTTAAACAGTGAGACAGAGCCTCCTGCAGAGGCCAATTTACCACCCATTCCAAGACAGGGCTCATGGAAACAATTGACAGATTCAAGGCAGCAGAAAAACACTCTCCATTCTAATAGGAAGTTGGGATTGAGTGGTCAAAGTTCCAATGATGTTAAGTTAGGAAACAAGAAACATCTTTCTATCAAGAAGCAGACTCCTATCAGCAACCAGTCCCAGGACACATCTGTTGAACGTCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGATACTGAGCTTCAGTGTGTTCCTGGACGGTTTGAATCAGTGGAAGAGTATGTTAGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTACAGTACTTGGGAAGAGTCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGAGTGAAGGCGAATGAGTCGAGGGAAAGAGGGTGGTATGATGTTAAAGTTCTTCCAGTACATGAGTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCATCCCCCAGGCCTGGATCAGTTAGATCCAAGCAGAACAATTCATCTGTAGCTCAGGATGACGGTGAATCAGAAGTCACTGGACGAGTGGTTGGTACGGTTAGGCGTCACATACCTATTGATACCCGTGATCCTCCTGGTGCTATTCTTCATTACTATGTTGGAGACTCTTATGATCCCAGCAGGCAAGTGTTCGTTAGAATTTTCCCCTTGAGGGTTGATGATGACCATATCATAAGAAAGCTTCTAAGTGGAAGCATCTGGTACCTCACCGTTCTTGGTTCTCTTGCCACCACGCAAAGGGAGTATGTTGCCCTACATGCATTTCGTCGACTAAATTTGCAGATGCAAAGTGCAATCCTTCAGCCTAGTCCCGAACACTTCCCTAAATACGAGCAACAGACCCCAGCCATGCCCGAATGCTTCACACAGAACTTTGTTGAGTATCTACGTAGGACCTTCAATGAACCCCAGTTGGCTGCAATCCAATGGGCTGCTACCCACACAGCTGCTGGCACAAGTAGTGGATCAACAAAAAGGCAAGAACCTTGGCCATTTACCCTCGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTGTGGGGAATGTTGAATGTCATTCACCTTGTTCAGTATCAGCACTACTACACCTCTTTACTAAAGCATGTGGCCCCTGAGAGCTACAAGCAAGTCAATGAGATTAATTCAGATAATGTCCCCACTGGATCTATTGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACCTTACCTAAACTGGTCCCAAAACCTAGAATGTTAGTCTGTGCTCCATCTAATGCTGCCACTGATGAGCTTCTTGCTCGTGTTCTGGATCGTGGATTTATTGATGGGGAGATGAAAGTTTATCGACCAGATGTGGCTCGAGTAGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCTGTTGAACGTAGAACTGAACAGCTTTTAATCAAGAGTCGGGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGTGAGGCACAACTGACTCAGCAGTTGCATTGTCTCCACAGAGATCTTAATGCTGCTGCTGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCCGAGATCAGAATCGAGATGCTTTGCTACAGAGCCTTGCTGCTGTGGTTGAAAACCGGGACAAGGTTTTGGTTGAGATGTCTCGCCTAGCCCTTCTTGAAAGTAGGTTTCGACCTGGTAGTGGATTTAATTTGGAAGAAGCCCGTGCTAGTTTGGAGGCCAGTTTTGCAAACGAAGCAGAGATTGTTTTCACTACAGTTTCTAGCAGTGGCCGGAAGTTGTTTTCTCGCCTTTCCCACGGTTTTGATATGGTGGTCATTGATGAGGCAGCTCAAGCCAGCGAGGTGGCAATTCTGCCTCCCCTCTCTCTCGGTGCAGCTCGATGCGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAGCAAGCAGGTTGCCCGACAATGTTGCTGTCTGTTCAGTATAGAATGCACCCTCATATTCGGGATTTCCCTTCTAGGTACTTCTATCAGGGGCGCCTTACCGATAGTGAAAGCGTGGCTAAACTGCCTGACGAGCCATACTACAAGGACCCTTTACTTAAACCTTACCTATTCTATGATATCAGACACGGGCGCGAGTCTCACAGAGGTGGATCAGTCTCTTATCAAAATATACATGAAGCACAATTTTGTCTCAGATTGTATGAGCATGTTCAGAAAACAGTCAAGTCTCTGGGTCTAGGAAAAATTACTGTTGGCATAATTACTCCATATAAGCTGCAATTGAAATGCCTCCAGCGTGAGTTTGACGAAGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAATACAGTAGATGCTTTCCAAGGTCAAGAACGAGATGTCATTATAATGTCATGTGTGCGTGCATCTAGTCACGGTGTTGGTTTTGTTGCAGATATTCGTCGGATGAATGTTGCCCTTACACGTGCAAGAAGGGCCCTTTGGGTAATGGGAAATGCGAATGCTCTGGTGCAATCTGAAGATTGGGCTGCATTGATTAATGATGCTAAATCTCGAAATTGCTATATGGACATGGACTCTCTTCCTAAAGACTTCCTGGTGTCCAAGGGACCTGTTTACACATCATTGCCTGGTAAGCCTTCATCAAATATGAGGGGCATGAGATCAGGTGGACCAAGATATAGATCAATGGATATGCATATGATGGAGTCCAGGTCGGGAGCACCGTCTGAAGATGACGAGAATATGGGTGCTCCAATTGGCTCCAGAAATGGGAACCATCGCCAATCAAGGTTTTCAATGGAGAACTCCGTAGATGATTTTGATCACGGGGGTGACAAATCCAGAGATACTTGGCAGTATGGTATACAGAAGAAGCAGAACTCATCTGGACCCATGGGAAAGAGAGACGTATAA 4206 0.4451 MGSRGRPLFDLNEPPADDNDDRDGIVCIQPQKTHPSTNPHASDLFATSTASQGIINNHAFSHASSVSGFQPFVRPKSTGVPESDAELKRAGDQDTKVSSKSSKDEDVKVIDSRIQSSTNAQPTEREEGEWSDEDVFANANGGNNANANGGSNANANVGNNLPQRSQAAEEVAESGMVDGGVVVAFDDKPRNLKSSDSINDEKGSHASIGLESNSSEQKSNSIPNSESNIKSETSTDALEEPALVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTVFLNLEDVKQAGPIKTSTPRRQNFSSSVVSRTIKEVRTIPAQIERVGIAKDQKLTETTSGEGGNHAEAHEPKSDCNGDTTGPLVRSRRLNSETEPPAEANLPPIPRQGSWKQLTDSRQQKNTLHSNRKLGLSGQSSNDVKLGNKKHLSIKKQTPISNQSQDTSVERLIREVTSEKFWHHPEDTELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNNSSVAQDDGESEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRQVFVRIFPLRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVALHAFRRLNLQMQSAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDNVPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCLHRDLNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQSLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLKPYLFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKGPVYTSLPGKPSSNMRGMRSGGPRYRSMDMHMMESRSGAPSEDDENMGAPIGSRNGNHRQSRFSMENSVDDFDHGGDKSRDTWQYGIQKKQNSSGPMGKRDV 1401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03050 1401 FunFam P-loop containing nucleoside triphosphate hydrolase 1089 1295 - -
Vimu11g03050 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 707 1292 IPR027417 -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 206 235 - -
Vimu11g03050 1401 Pfam AAA domain 708 1060 IPR041677 GO:0004386
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 559 576 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 1306 1325 - -
Vimu11g03050 1401 Gene3D - 1089 1295 IPR027417 -
Vimu11g03050 1401 PANTHER DNA2/NAM7 HELICASE FAMILY 267 1358 IPR045055 -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 393 426 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 1333 1401 - -
Vimu11g03050 1401 CDD SF1_C_Upf1 1091 1280 IPR047187 -
Vimu11g03050 1401 CDD DEXXQc_SETX 708 1090 - -
Vimu11g03050 1401 Gene3D - 644 1088 IPR027417 -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 336 426 - -
Vimu11g03050 1401 Pfam AAA domain 1067 1263 IPR041679 -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 66 281 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 11 27 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 557 580 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 81 111 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 1 45 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 137 167 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 30 45 - -
Vimu11g03050 1401 Coils Coil 893 913 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 264 281 - -
Vimu11g03050 1401 MobiDBLite consensus disorder prediction 1363 1383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03050 Vimu-Chr11 50050329 50056278 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03050 - K10706 gmx:100794516 2520.73