Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03041 ATGAGTTTTCTGTTCGGCAATAGAAAGACTCCCGCCGAGCTTTTGAGGGAGAACAAAAGGATGCTGGACAAGTCCATTAGAGAAATAGAAAGGGAAAGGCAAGGCTTGCAGAATCAAGAAAAGAAATTGATTGTCGAGATTAAGAAGAATGCCAAACAAGGGCAGATGAAGTTTGTTGCTTTTAAGGATTGTGATTTAGTGTACTGGGGTGAGTGGTGTCTAGGGTTGAGTTTACTTGATCAGGGGGCAGTGAGAGTGATGGCCAAGGATCTCATCAGGACTCGCCATCAGATTGAAAAGTTTTACAAGCTCAAATCGGAACTTCAGGGTGTTTCTTTGAGAATTCAGACGCTAAAATCCACTCAAGCAATGGGGGAGGCTATGAAAGGAGTTACTAAAGCAATGGGTCAAATGAATAGGCAGATGAATTTGCCTTCGCTACAGAGGATAATGCAAGACTTTGAAAGGCAGAATGAGAAGATGGAACTGGTTTCTGAGGTAATGGGAGATGCAATTGACGATGCTTTGGAAGGTGATGAAGAGGAGGAAGAGACAGAAGATCTTGTGAATCAGGTTCTTGATGAGATCGGAATTGATATCAACTCTGAGCTTTTGAATGCTCCTGCATCAACCTCTGTCACTGCACCAGCGGCAAATAACAGGGTTGCTCAAGCTGAATCAACGGGTCATGAAGACAGTGGAATAGATGAAGACCTACAGGCTAGGTTAAATAACCTGAGAAAAATGTGA 750 0.4307 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMKFVAFKDCDLVYWGEWCLGLSLLDQGAVRVMAKDLIRTRHQIEKFYKLKSELQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQRIMQDFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSELLNAPASTSVTAPAANNRVAQAESTGHEDSGIDEDLQARLNNLRKM 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03041 249 Pfam Snf7 17 209 IPR005024 GO:0007034
Vimu11g03041 249 Gene3D - 6 205 - -
Vimu11g03041 249 Coils Coil 12 46 - -
Vimu11g03041 249 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 247 IPR005024 GO:0007034
Vimu11g03041 249 MobiDBLite consensus disorder prediction 216 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03041 Vimu-Chr11 50007613 50009612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03041 K12191 - qsu:111998886 342.813