Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03036 ATGACGGAGAGTCTTCACCATCTTCATCGGCGACGACACCGTCCTTCAACGCCAGGAACATCCGAACAAGCCAATTGCAGCAATCCCGAGTTGTGCATCAACTTCAGTGGGAAGTTGAGAACAGTTCTTCTCATCTCCGATTTCAGTGAAAGGCGTGCAGCTAGTGTAAGTATAACAGTTCATCGGGCAGGGCAGATGGATCAGGTATGTTCAAGGTTCATCAACAGCATTGCGCTGCTTGATCCATTTACCCTGAGGGATTGTTTCTTAGATGCTGATCAATACTGGAGAACATCCTTCCAGTCATTGCTTACTAGCAGACAATGCTCAAGTTGCTCGTGTGTCAGATTTTGGCAAGAACGACACAATTTTAACATCAAGACTCATGTGGGCCATCTTTTAAATCCTGGTGATTATGCTCTTGGTTGTGAACTGTATGAGGCTAATAGTGATGACATGGAGTTGGACAAGTACAAAGGGCACATTCTTGAAGCAATTTTAATAAAGAAGAGAGTACCAGCCATCAGAGGTGGCATCGGTGACTGTGGCGATGAGCTACCTTCTGTTCCATTGGATGAACTATTGGCTGATCTTGATCTGAGTGAAGATGAAGATGAAGAAGACAACATGACAGAATGA 639 0.446 MTESLHHLHRRRHRPSTPGTSEQANCSNPELCINFSGKLRTVLLISDFSERRAASVSITVHRAGQMDQVCSRFINSIALLDPFTLRDCFLDADQYWRTSFQSLLTSRQCSSCSCVRFWQERHNFNIKTHVGHLLNPGDYALGCELYEANSDDMELDKYKGHILEAILIKKRVPAIRGGIGDCGDELPSVPLDELLADLDLSEDEDEEDNMTE 212
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03036 212 MobiDBLite consensus disorder prediction 1 25 - -
Vimu11g03036 212 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 120 173 IPR039768 GO:0043023
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu11g03036 Vimu-Chr11 49965777 49969187 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03036 K07562 - gmx:100799026 138.658