Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03034 ATGTTTTGCAGACCTTCATGCTGGGTGGATCACATGTCACTGGACAATGAAACAGGATTAGATCCACCAGGCATAAGAGTTAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTGCAGGATACTTTGTTTGGGCAGTTCTGATTGCTAACTTGGCTCGCATTGGTTATGAAGAAAAAACCATGTACATGGCCTCGTATGATTGGAGAATAGCATTTCAGAACACTGAGGTGAGGGATCAAACACTTAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGTGGCAACAAGGCAGTTATTATTCCACATTCAATGGGTGTATTATACTTTCTTCATTTTATGAAATGGGTTGAAGCACCAGCTCCAATGGGTGGTGGTGGAGGACCAGATTGGTGTTCTAAATATATAAAGGCAGTTTTAAACATTGGTGGGCCATTTTTGGGTGTCCCAAAGGCTATAGCAGGGCTCTTCTCAGCTGAGGCCAGGGATATTGCAGTTGCCAGGACAATAGCTCCAGGATTTTTAGACAACGATCTGTTTCGGCTTCAAACTTTGCAACATGTAATGAGGATGACTCGTTCTTGGGACTCAACAATGTCAATGATACCAAGAGGAGGAGATACTATATGGGGTGGTCTTGACTGGTCACCAGAGGAAGGCTATCACCCTGGCAAGAGAAAGCACAACGATGGTTATACTCAGCTTGCACACCAAGAGACAAATGAAACGCATTCTGTCGGTGCCCTCAAGGGTCGCAGTGTTGCTAATACCACGTGTCGCGACGTGTGGACCGAATACCATGAAATGGGAATTGAGGGAGTAAGAGCAGTTGCTGAACATAAGGTTTACACAGCTGGCTCAATCGTAGACCTGCTTCATTTTGTTGCTCCAAAGATGATGGCTCGTGGTAGTGCTCATTTCTCTTATGGAATTGCTGACAATTTGGATGATCCTAAATACAGTCACTACAAGTATTGGTCAAATCCCTTGGAAACAAAATTACCAAATGCTCCTGATATGGAAATCTTCTCTTTGTATGGAGTTGGCTTACCAACTGAAAGATCTTATGTGTACAAGTTAACTCCCTTTGCCTCCTGTTACATTCCTTTTGAAATTGACACTACACAAGATGATGGTAATGGTGAAGATAGGTGGCTGCAAGGTGGAGTTTACACTGTTGATGGTGATGAGACTGTGCCAGTTCTGAGCTCAGGCTTCATGTGTGCTAAAGGTTGGCGTGGAAAAACAAGATTCAACCCTTCTGGCATTCGCACCTACGTTAGAGAATATGATCATTCTCCTCCAGCCAACTTGCTAGAAGGAAGAGGCACACAAAGTGGTGCTCATGTTGACATCATGGGAAACTTTGCATTGATTGAGGATGTTATTAGAGTGGCAGCAGGGGCCACAGGAGAAGATCTAGGAGGTGATAGAGTGTACTCTGATATCTTTAAATGGTCTGAGAAAATCAAGTTGCCACTATGA 1500 0.4373 MFCRPSCWVDHMSLDNETGLDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMASYDWRIAFQNTEVRDQTLSRIKSNIELMVATNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCSKYIKAVLNIGGPFLGVPKAIAGLFSAEARDIAVARTIAPGFLDNDLFRLQTLQHVMRMTRSWDSTMSMIPRGGDTIWGGLDWSPEEGYHPGKRKHNDGYTQLAHQETNETHSVGALKGRSVANTTCRDVWTEYHEMGIEGVRAVAEHKVYTAGSIVDLLHFVAPKMMARGSAHFSYGIADNLDDPKYSHYKYWSNPLETKLPNAPDMEIFSLYGVGLPTERSYVYKLTPFASCYIPFEIDTTQDDGNGEDRWLQGGVYTVDGDETVPVLSSGFMCAKGWRGKTRFNPSGIRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVIRVAAGATGEDLGGDRVYSDIFKWSEKIKLPL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03034 499 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 2 493 - -
Vimu11g03034 499 SUPERFAMILY alpha/beta-Hydrolases 41 444 IPR029058 -
Vimu11g03034 499 FunFam Phospholipid:diacylglycerol acyltransferase 1 9 197 - -
Vimu11g03034 499 Gene3D alpha/beta hydrolase 14 183 IPR029058 -
Vimu11g03034 499 Pfam Lecithin:cholesterol acyltransferase 5 459 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03034 Vimu-Chr11 49937329 49942956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03034 5 499 Acyl Lipid Metabolism Gene Families AT5G13640 72.849 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03034 K00679 - gmx:100812643 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03034 11 49937329 49942956 Vimu11g03034 11 49937329 49942956 ECH