Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03027 ATGAGAGGTATATCAGTTACAATGGAGGATAAAAGGGAGTTGAAAGAGGAGAAGAAATGGTGGAAAACATGTATAGAAAAAATGGGGAATTGGCTGGGAATTAACGTGAACAAGGATGAATGGCTGAAGGACATGAGAGGGAATCTGAGTTTGGCTGCTACCATAATCACAACCATGACCTTTCAAACTGCTATTAATCCACCAGGTGGTGTTAGACCAGCGAAAGATACTGGACATGTGAAATGTAGAGGATCTGAAGATGGTAATCTATGCCCTGGTGAAGCAGTTCTAGCTGCACTTTACCCATCTGAGTATTACAGATTCCTTCTGTCCAACACTATATGCTTCGTTTCATCCTTAGCTGTGTGCCTTTTGCTTGTGAGTGGCTTCCCTCTGAATCACAGATTTTTCACGTGGCTTCTGTCAATAGGCACCTGCATCACCATGACCAGCCTCGCTATGACCTACATGCTTGCTGCAGATATGGTCACACCTTCTCCCGTCTGGGAAGCCAACGATATTACCGTCTTTGATAAAGTCATTTACATTTGGCTTTCACTCCTAAGCCTAGTCACACTTGTCCTTTTTCTGCGGCTCTTTGTTTGGATTTTCACTAAATTCATTGACAAACGTAAACCATGA 642 0.4299 MRGISVTMEDKRELKEEKKWWKTCIEKMGNWLGINVNKDEWLKDMRGNLSLAATIITTMTFQTAINPPGGVRPAKDTGHVKCRGSEDGNLCPGEAVLAALYPSEYYRFLLSNTICFVSSLAVCLLLVSGFPLNHRFFTWLLSIGTCITMTSLAMTYMLAADMVTPSPVWEANDITVFDKVIYIWLSLLSLVTLVLFLRLFVWIFTKFIDKRKP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03027 213 PANTHER CASKIN 22 200 - -
Vimu11g03027 213 Pfam Domain of unknown function 40 156 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03027 Vimu-Chr11 49891859 49892500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03027 13 168 Miscellaneous Gene Families AT1G14480 28.025 6.74e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03027 - - gmx:100803370 271.166