Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03026 ATGAGAGGTATATCAGTTACAATGGAGGATAAAAGCGAATTGAAAGAAGAGAAGAAATGGTGGAAAACATGTGTAGAAAATATGGGGAATTGGCTGGCAAACAAGAACAAGGATGAATGGCTGAAGGACATGAGAGGGAATCTGAGTTTGGCTGCCACCATAATCACAACCATGACCTTTCAAACTGCTATTAATCCACCAGGTGGTGTTAGACCAGCGACAGAGACTGGACATGTGAAATGTATACCAACGGTAGAAGGTGATCCATGCCCAGGTGAAGCAGTTCTAGCTGTAGTTTTCCCAGATGTTTATATCAGATTCCTTTTGTCGAACACTATATGCTTCGTTTCATCCTTAGCTGTGTGTCTTTTGCTTGTGAGTGGCTTCCCTCTGAATCATAGATTTTTCACGTGGCTTCTATCAATATGCACCTGCATCACCATGACCAGCCTCACTGTGACCTACATGATTGGTGCAGAAATGGTCACCCCTTATCCTGTCTGGTACACCACCGATACCATGTTTAATAAAGTCATTTATATTTGGTTTTCACTCCTAGGACTCGTCACACTTGTCCTTTGTCTGCGGCTATTTGTTTGGATTCTCACTAAATGCATTGACAAACGTAAACCATGA 636 0.423 MRGISVTMEDKSELKEEKKWWKTCVENMGNWLANKNKDEWLKDMRGNLSLAATIITTMTFQTAINPPGGVRPATETGHVKCIPTVEGDPCPGEAVLAVVFPDVYIRFLLSNTICFVSSLAVCLLLVSGFPLNHRFFTWLLSICTCITMTSLTVTYMIGAEMVTPYPVWYTTDTMFNKVIYIWFSLLGLVTLVLCLRLFVWILTKCIDKRKP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03026 211 Pfam Domain of unknown function 39 159 IPR026961 -
Vimu11g03026 211 PANTHER CASKIN 32 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03026 Vimu-Chr11 49887325 49887960 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03026 13 199 Miscellaneous Gene Families AT1G14480 24.868 1.25e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03026 - - gmx:100803370 300.056