Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02977 ATGACGACGTCGTCTGGTTCGGTGAACAACGCCATGCCCTCAGGCCTCCAAGAAGTGCTTCTTAACCGAAAGCGCACCGAACAAGAAGAAGAACCCAACAACAATGCCCAAACCTCAATTTCGCTCTCGCAACCTTCTTCACCCGCCGGTGATGCCGTCGCCGGCGAAGGTGACAGCTCAATCTCCAAACCCGTCGTGTTGGTAACCAATAGCGACGGCATCGAGTCCCCGGGTTTAACATTCCTCGTCCAAGCTCTCGTGCGCCTCGGCCTCTATGATGTCCATGTCTGCGTTCCCCAATCGGACAAATCTGTTTCGGGTCACTCCCTCACTATCGGAGAAACCGTGGAAGCCTCTTCTGCTCTGATTGACGGTGCCACCGCCTTTGAAGTTTCAGGAACTCCTGTCGATTGTATTTCACTAGCGTTATCTGGGGCCTTGTTTTCATGGTCAAAGCCAATTCTGGTTATTAGCGGAATTAACCAGGGATCAAGCTGTGGTCATCTCAAGTTCTACTCAGGTGGTGTTGCTGGTGCAAGAGAGGCGTTATTATGTGGTGTACCTTCTTTGTCAATATCATTAAATTGGAAGAAGGATGAAAGTCAAGAGACTGATTTCAAGGATGCAGTAGAGCTCTGTTTACCTTTAGTAAAGGCAGCTATCAGGGATGTTTTACAAGGAACTTTCCCCAAAAGCTGTTTTCTGGGTATAGAAATTCCGACATCACCTTTAAGCAGCAAGGTCTTTAGATATAATATGGCTGCTGTGGTATTGTTTTACCGACAGGGCTACAAGTTGACCAAGCAAAGTATGTGGAGATCCACTCCAAACTGGCAGGCAGTTTCAAGTAGCCGCTATCCTCCTGGTCATTTCTTGGCCAGTAAACAAGGCTTTGGTCTTCAGTTTGCACGGATTGGCCGTGATGCCTCTGCTGCTAATCTTTCACATCTTGGTATACTTCAGGGTGCAGCTCGGAGATTAACTACTCAGAAAAAGAATTTGGAGATTGTTGAATCAATTGGAGCTGCAGGAAAACCTGATTCTAACAGAGTGAAGAAGTACTTCAAACTAGAGGTAAATGACAGGGAGATGGCAGTACGGGTCAACCGTCCCATACCAAGTTTAGGGAAGGTTGACTGCTTTTTGAAAGTAGATTTGGAAATGGGAAGGTCGACAACCACCTCATTTCCAACTTTCCTAGAAATGAAAATAAAAGTGTTTTTGGATAAACAGCAGGAAGATATAGATGATGATCTGGATTACAGAGCACTTGAAACTGGATATGTTGCAGTTACTCCTCTCTCTCTGTCTCCTCATACTGAGACGGATATTCAAATGGCAGTTTCTGATTGGCTTTCATCTGTACTTCCTGGTGAACAATAG 1383 0.4591 MTTSSGSVNNAMPSGLQEVLLNRKRTEQEEEPNNNAQTSISLSQPSSPAGDAVAGEGDSSISKPVVLVTNSDGIESPGLTFLVQALVRLGLYDVHVCVPQSDKSVSGHSLTIGETVEASSALIDGATAFEVSGTPVDCISLALSGALFSWSKPILVISGINQGSSCGHLKFYSGGVAGAREALLCGVPSLSISLNWKKDESQETDFKDAVELCLPLVKAAIRDVLQGTFPKSCFLGIEIPTSPLSSKVFRYNMAAVVLFYRQGYKLTKQSMWRSTPNWQAVSSSRYPPGHFLASKQGFGLQFARIGRDASAANLSHLGILQGAARRLTTQKKNLEIVESIGAAGKPDSNRVKKYFKLEVNDREMAVRVNRPIPSLGKVDCFLKVDLEMGRSTTTSFPTFLEMKIKVFLDKQQEDIDDDLDYRALETGYVAVTPLSLSPHTETDIQMAVSDWLSSVLPGEQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02977 460 MobiDBLite consensus disorder prediction 1 58 - -
Vimu11g02977 460 PANTHER 5'-NUCLEOTIDASE SURE 61 456 IPR030048 GO:0008252
Vimu11g02977 460 Gene3D - 56 454 IPR036523 GO:0016787
Vimu11g02977 460 MobiDBLite consensus disorder prediction 1 16 - -
Vimu11g02977 460 MobiDBLite consensus disorder prediction 32 48 - -
Vimu11g02977 460 SUPERFAMILY SurE-like 65 271 IPR036523 GO:0016787
Vimu11g02977 460 Pfam Survival protein SurE 66 245 IPR002828 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02977 Vimu-Chr11 49424686 49430635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02977 K03787 - gmx:100776267 571.237