Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02975 ATGACAATGCCTACTATGTGTTTGTTAGTTCTCTTTTCTGTCATTTATGGCAGTGTAGCTACCCATCATTTTAGCAGAAATCTTCAGACTCTGTCTTCTGATTCCAATGATCAACCTTACAGAACCGCTTATCACTTCCAACCTCCCAAGAATTGGATAAATGGACCAATGAGATATGGAGGACTTTATCATCTGTTCTATCAATACAATCCAAAAGGTGCAGTTTGGGGAAATATAGTGTGGGGACATTCAGTGTCAAAGGATCTTGTGAACTGGACCACACTAGATCCTGCCATCTTCCCATCTCAGCCGTCTGATATAAATGGTTGTTGGTCAGGATCAACCACACTGCTTCCTGGGAACAAACCAGCCATTTTGTATACAGGAATTGACTCCATGAAAAACCAAGTCCAAAACTTGGCCAAGCCCAAAAATTTGTCTGACCCTTTTCTTAGGGAATGGGATAAGTTCCCCCAAAACCCTGTAATGGCACCAACTAGCGATAACAATATAGTTCCAGACTCATTTAGGGATCCCACCACTGCTTGGCTAGGACAAGATGGACAATGGAGAGTACTTGTTGGAAGCAGAAGAAGAACTAGGGGAATGGCACTGTTGTATAGGAGCAAAGACTTTGTTAATTGGGTTCAAGCCAAGCACCCTTTTTATTCAACCAAAGACAGTGGAATGTGGGAGTGCCCAGATTTTTTTCCAGTTTTGAAGAATGGTCAATTGGGTGTTGAGACATCTGTGAATGGTGATGATGTTATTCATGTACTCAAGGCTAGCTTGAAAGGACATGATGATTATATTATAGGGAATTACAATACTGTCAAGGATGTGTTTGTCCCTGATAAAGGGTTTGATGAATTTGTTTTAAGATTTGATTATGGAAAATACTATGCCTCAAAATCTTTCTTTGATGATGGAAAGAAGAGAAGGGTTTTGCTTGGGTGGGTGGACGAATTATCAAGTGAGGCAGATGATATCAAGAAAGGATGGTCTGGAATCATTGCAATTCCAAGGGCCATTTGGTTGCACAGGTCTGGTAAACAGCTGGTACAATGGCCTGTGATGGAAATTGAAAAGCTGCGTGCAAACCCAGTGAGCTTGCCCCCACAAGTGCTAAAAGGAGGACAATTGCTTCAAATTAATGGAGTTACAGCAACACAGGCTGATGTTGAAATTTCATTTGAAGTGAGTAAAGTGATAGAGGCTGAAGTATTGGAAAATTGGACAGACCCCCAAATTCTGTGTAGTCAAAAGGGTTCATCCATTAAAAGTGAATTGGGGCCGTTTGGTCTGCTAGTTTTTGCTTCTGAGGGATTGCAAGAGTTCACATCAGTTTTCTTCAGAATATTCAAATACCAGAATAAAAATTTGGTGCTCTTATGCAGTGATCAAAGCAGGTCTTCCTTAAATAAAGACAATGATTTGACCACTTATGGAGCTTTTGTTGACGTGGAACCTCTTCATGAACAGCTTTCACTGAGAACACTGACTGATCATTCTGTCGTAGAGAGTTTTGGAGGAGAGGGAAGAACCTGTATCACAGCCAGAGTTTACCCCACATTGGCCATCAATGATAAAGCACAACTATATGCTTTCAATAATGGCACTGCTGATGTTAACATTACAAGACTGAATGCTTGGAGCATGAAGAAAGCACAAATAAATTGA 1680 0.4077 MTMPTMCLLVLFSVIYGSVATHHFSRNLQTLSSDSNDQPYRTAYHFQPPKNWINGPMRYGGLYHLFYQYNPKGAVWGNIVWGHSVSKDLVNWTTLDPAIFPSQPSDINGCWSGSTTLLPGNKPAILYTGIDSMKNQVQNLAKPKNLSDPFLREWDKFPQNPVMAPTSDNNIVPDSFRDPTTAWLGQDGQWRVLVGSRRRTRGMALLYRSKDFVNWVQAKHPFYSTKDSGMWECPDFFPVLKNGQLGVETSVNGDDVIHVLKASLKGHDDYIIGNYNTVKDVFVPDKGFDEFVLRFDYGKYYASKSFFDDGKKRRVLLGWVDELSSEADDIKKGWSGIIAIPRAIWLHRSGKQLVQWPVMEIEKLRANPVSLPPQVLKGGQLLQINGVTATQADVEISFEVSKVIEAEVLENWTDPQILCSQKGSSIKSELGPFGLLVFASEGLQEFTSVFFRIFKYQNKNLVLLCSDQSRSSLNKDNDLTTYGAFVDVEPLHEQLSLRTLTDHSVVESFGGEGRTCITARVYPTLAINDKAQLYAFNNGTADVNITRLNAWSMKKAQIN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02975 559 SUPERFAMILY Arabinanase/levansucrase/invertase 36 358 IPR023296 -
Vimu11g02975 559 CDD GH32_Fruct1-like 51 346 - -
Vimu11g02975 559 Pfam Glycosyl hydrolases family 32 N-terminal domain 45 357 IPR013148 -
Vimu11g02975 559 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 15 558 - -
Vimu11g02975 559 Pfam Glycosyl hydrolases family 32 C terminal 360 552 IPR013189 -
Vimu11g02975 559 Gene3D - 368 553 - -
Vimu11g02975 559 SUPERFAMILY Concanavalin A-like lectins/glucanases 357 555 IPR013320 -
Vimu11g02975 559 Gene3D Glycosyl hydrolase domain; family 43 49 367 IPR023296 -
Vimu11g02975 559 SMART glyco_32 45 513 IPR001362 GO:0004553|GO:0005975
Vimu11g02975 559 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 369 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02975 Vimu-Chr11 49417444 49421116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02975 57 559 Glycoside Hydrolase AT3G13790 61.748 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02975 K01193 - gmx:547681 955.666