Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02972 ATGGTGCTTGCGTCCATTCGTCTTCTTCCTTCTCCATTCCTCGCTTTTGCTCCTTGTCGCTCTCCATATTCATGGCGCCCTCGTCCCTCTTCCGTTACCGCCTTCTCTTCTCTCCACTCCTCGGCTTCTAAGGGAGACGGCGGAGTGGAACTAGGTGGTGATCAAAGACAAGCAGAAGTTATTTTTTTGGGGACTGGAACCAGTGAAGGGGTTCCTCGTGTTAGTTGCTTGACTAACCCTTTAAACAAATGTGAGGTGTGTTTAAAAGCTGCCCAACCGGGTAATAAGAATAGGAGACTTAACACAAGCATTCTCATTCGTCACCCAAATTCTTCAGGAACACAGAATATTCTTATAGATGCTGGAAAGATAAGAACAATAGATGCTGTCATTATTACTCATTCACATGCTGACGCAATTGGAGGTCTTGATGATCTCAGAGATTGGACAAACAATGTTCAGCCTCATATTCCAATATATGTAACCAAACGAGACTTTGAGGTGATGACAAAGACCCATTATTATTTAGTAGATACTAGTGTGATTTTACCTGGTGCCAAAGTCTCAGAGTTGCAATTCAAAATCATATCGGAAGAATCATTTTTTGTACACGGACTGAAGATTACCCCATTACCAGTTTGGCACGGCCAGAATTATAGGTCTCTTGGTTTTCGTTTTGGTAATATCTGTTACATTAGTGATGTTAGTGAAATTCCTGAAGAAACTTACCCACTTCTAAAGGACTGTGAAATTCTAATCCTGGATGGATTAAGACCCGATCGTTCTACTTCCACACATTTTGGACTTCCAAGGGCGTTGGAGGAAGTGCGAAAAATTCAACCCAAAAGAACACTTTTTACTGGTATGATGCATCTGGTGGATCATGAAGAAGTGAATGACTACCTTGCGAGCTTATTGGAGTCTGAAGGTCTTGATGCACAACTGAGCTATGATGGACTTCGTATACCAGTCAGACTCTAG 981 0.422 MVLASIRLLPSPFLAFAPCRSPYSWRPRPSSVTAFSSLHSSASKGDGGVELGGDQRQAEVIFLGTGTSEGVPRVSCLTNPLNKCEVCLKAAQPGNKNRRLNTSILIRHPNSSGTQNILIDAGKIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVTKRDFEVMTKTHYYLVDTSVILPGAKVSELQFKIISEESFFVHGLKITPLPVWHGQNYRSLGFRFGNICYISDVSEIPEETYPLLKDCEILILDGLRPDRSTSTHFGLPRALEEVRKIQPKRTLFTGMMHLVDHEEVNDYLASLLESEGLDAQLSYDGLRIPVRL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02972 326 SMART Lactamase_B_5a 100 289 IPR001279 -
Vimu11g02972 326 SUPERFAMILY Metallo-hydrolase/oxidoreductase 59 324 IPR036866 -
Vimu11g02972 326 Gene3D - 54 325 IPR036866 -
Vimu11g02972 326 PANTHER HYDROLASE C777.06C-RELATED-RELATED 59 325 - -
Vimu11g02972 326 Pfam Beta-lactamase superfamily domain 120 287 IPR001279 -
Vimu11g02972 326 CDD metallo-hydrolase-like_MBL-fold 59 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02972 Vimu-Chr11 49377374 49381593 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02972 - - gmx:100778396 561.222