Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02959 ATGAAGAAGAAGATGAAGGGAAGCACCGCCATATCGGTCGTCTTCGCCGCGCTCTTCCTCTTCTCCTCCGTCAACTCCTTCTACCTTCCCGGCGTTGCTCCTCGCGATTTCCAAATTGTACGTATTCCATTTCTTCTCTCTCCGTTCCTTCCTTTTCCTTTCTTTCAAATTCCACGCGATGATGATGGATTTTGTGTTCGTGAAATAACTGAATTAGTTTTGGATGATTCCGTTGTTCTGATGTTTTTTATTTTCCTTAATTTAGAATGTTGTGTAATGGAGTCGTTAGTTCTGTATAATGACAATCGTGTTGCCGATTCCGAGGACGGAATCTTGCGAGATTTTCGTGTTCGGTTACGAGCTCTTTCGTCGGTGTTTGAGTCCTCTTTACGCTGTTTTCGAGGAGGGAAGAATGAAGATACTGAGTTGTTGTTTCATGTGTGGCATCAGGGTGACCCCCTTTCTGTCAAAGTGAACAAACTATCATCTACAAAGACTCAACTTCCATATGACTACTACTTCTTGAACTATTGCAAACCCTCCAAGATAGTGAACAACGCAGAGAATTTGGGAGAGGTGCTTAGAGGTGATCGCATTGAGAATTCAGTGTATACGTTTGAAATGAGGAAGGAACAGTCTTGCACTGTTGTCTGTCATCATAAGTTAGATGCTGAATCTGCTAAGAGTTTTAAAGAAAAGATTGATGATGAATATCGAGTGAACATGATTTTGGATAACCTTCCTGTTGCTGTTCGTAGACAAAGGAGGGATGGAAGTCCCTCAACAACATATGAACATGGATTTCGTGTTGGGTTCAAAGGAAACTATCAAGGGAGCAAGGAGGAGAAATATTTTATCAATAACCACTTGAGTTTTAGAGTCATGTATCACAAGGATCCAGAAACTGGTTCTGCTCGTATTGTTGGATTTGAGGTCACCCCAAACAGTATAAATCATGAATACAAGGAGTGGAATGACAAGGACCCACAGGTAACAACATGCAATAAAGATACCAAGAATTTGATGCAAGGTAGTACAGTCCCACAAGAAGTTGATACAGGCAAGGATGTCGTATTCACATATGATGTTTCCTTTAAGGAAAGTGATATCAAATGGGCATCACGGTGGGACACATATCTTTTAATGAATGATGATCAGATCCACTGGTTCTCCATCATTAACTCTCTGATGATTGTTCTTTTCTTGTCTGGAATGGTAGCAATGATCATGATGAGAACTCTTTACAGAGATATTGCTAACTATAATCAGCTAGAAACCCAAGATGAGGCCCAAGAAGAAACTGGGTGGAAACTTGTTCATGGAGATGTTTTCAGGCCACCAATCAATTCGAATTTGCTGTGTGTTTATGTTGGTACTGGTGTTCAGATCTTTGCAATGACAGTTGTGACAATGGTATTTGCTTTGCTAGGGTTTTTGTCTCCATCTAATCGGGGAGGTCTCATGACTGCGATGGTTCTGTTGTGGGTATTTATGGGCTTATTTGCTGGGTACTCCTCATCACGTTTGTACAAGATGTTCAAGGGCACAGAATGGAAAAGGAATACCTTGAAAACTGCTTTTATGTTTCCGGGCATTCTTTTTGCTGTCTTCTTTGTACTTAATGCTTTAATCTGGGGGGAGCAGTCCTCTGGAGCAGTCCCTTTCGGAACCATGTTTGCCCTAGTCTGCTTATGGTTTGGTATTTCAGTACCCTTGGTCTTTGTGGGCAGTTACCTGGGATTTAAAAAGCCGACTATTGAAGACCCAGTGAAGACTAATAAAATTCCTAGGCAGGTACCTGAGCAGGCATGGTATATGAAACCTGTCTTCTCAATTCTTATTGGAGGCATTCTTCCATTTGGTGCAGTGTTTATCGAACTCTTCTTTATCCTCACATCAATATGGCTGAACCAGTTCTATTACATCTTTGGCTTCCTTTTCATAGTGTTTGTAATCCTATTAATCACCTGTGCCGAGATTACCATTGTGCTTTGCTACTTCCAATTGTGCAGTGAGGATTATAATTGGTGGTGGAGATCGTACCTCACTGCTGGGTCCTCTGCCTTGTACCTTTTCCTCTACTCAATTTTCTACTTCTTTACAAAGTTAGAGATTTCAAAGCTGGTCTCGGGCATCCTCTACTTTGGATACATGATAATTGTTTCATACGCCTTCTTTGTGTTGACGGGAACTATTGGGTTCTATGCTTGCTTCTGGTTTGTTCGCAAGATTTACTCTTCGGTGAAGATTGACTGA 2256 0.4131 MKKKMKGSTAISVVFAALFLFSSVNSFYLPGVAPRDFQIVRIPFLLSPFLPFPFFQIPRDDDGFCVREITELVLDDSVVLMFFIFLNLECCVMESLVLYNDNRVADSEDGILRDFRVRLRALSSVFESSLRCFRGGKNEDTELLFHVWHQGDPLSVKVNKLSSTKTQLPYDYYFLNYCKPSKIVNNAENLGEVLRGDRIENSVYTFEMRKEQSCTVVCHHKLDAESAKSFKEKIDDEYRVNMILDNLPVAVRRQRRDGSPSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGSARIVGFEVTPNSINHEYKEWNDKDPQVTTCNKDTKNLMQGSTVPQEVDTGKDVVFTYDVSFKESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLETQDEAQEETGWKLVHGDVFRPPINSNLLCVYVGTGVQIFAMTVVTMVFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSSRLYKMFKGTEWKRNTLKTAFMFPGILFAVFFVLNALIWGEQSSGAVPFGTMFALVCLWFGISVPLVFVGSYLGFKKPTIEDPVKTNKIPRQVPEQAWYMKPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITIVLCYFQLCSEDYNWWWRSYLTAGSSALYLFLYSIFYFFTKLEISKLVSGILYFGYMIIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02959 751 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 146 751 IPR004240 GO:0016020
Vimu11g02959 751 SUPERFAMILY MFS general substrate transporter 392 572 IPR036259 -
Vimu11g02959 751 Pfam Endomembrane protein 70 169 707 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02959 Vimu-Chr11 49285421 49288859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02959 149 751 Miscellaneous Gene Families AT3G13772 88.557 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02959 K17086 - gmx:100781403 1178.31