Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02939 ATGGTTGGTACAGTTGTAGATTCTCCACTGGACTTCTTCTCAGGAAGATTAACAAAGAAGGAAAGGAAAGCAACACTTGCAGATGAGCTGCTTTCTGATCAAAACCTTGCAGCCTATAGGAAACGCAAGGTTCGAGAAATTGAAGAACAGAATCGACCAGGTGGGAATGAAAAGTGGAAGATTAAAGCTGTAATGGCACACCAAGCAGCTGCACACGACCTGCTGAAAGGAAACCTTACCGGCGGAAAGACTCTGATCAACAAGGTATGCTCAGATTCCCCAACCAAAAACCTCTGCGTTCAGGTCCTCTCTTCTGACACACTCAAAAGCCCCGACCTCAAAGATTTGGCACTCATTTCCCTTAGGGTTGCTGCCACAAATGCTTCCGGCATCCTCGCCGACACCAAAATTCTCATCGACGACGACGAACTTGACCCTGATGTCCAACAAGGTTTGGCTGATTGCAAGGAGAACATCCTGGACGCAGAAAGCCAGCTGGAAGACACCATTGCTGCCTTGATGGTCAATTCTGAAAACGACGCTCAGCGCTGGCTCAAGGCTGCCTTGGCTGCCATCGACACCTGCGACGCCTCCATCCCCGGAGACGACGACGTTCTCTCCGTTGAGAGCGCCGTCTTCTGCAAGCTCTGCAACATTGCCATCCTTGTCATCAAGGAACTCAATAATCAAACGAAATCTTAA 702 0.4929 MVGTVVDSPLDFFSGRLTKKERKATLADELLSDQNLAAYRKRKVREIEEQNRPGGNEKWKIKAVMAHQAAAHDLLKGNLTGGKTLINKVCSDSPTKNLCVQVLSSDTLKSPDLKDLALISLRVAATNASGILADTKILIDDDELDPDVQQGLADCKENILDAESQLEDTIAALMVNSENDAQRWLKAALAAIDTCDASIPGDDDVLSVESAVFCKLCNIAILVIKELNNQTKS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02939 233 PANTHER UNCHARACTERIZED 2 64 IPR039883 -
Vimu11g02939 233 NCBIfam pectinesterase inhibitor domain 80 227 IPR006501 GO:0004857
Vimu11g02939 233 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 227 IPR035513 -
Vimu11g02939 233 Pfam Plant invertase/pectin methylesterase inhibitor 85 221 IPR006501 GO:0004857
Vimu11g02939 233 SMART PMEI_2 81 223 IPR006501 GO:0004857
Vimu11g02939 233 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 84 227 IPR035513 -
Vimu11g02939 233 Coils Coil 152 172 - -
Vimu11g02939 233 Pfam Fcf2 pre-rRNA processing 2 43 IPR014810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02939 Vimu-Chr11 49142200 49144077 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02939 - - gmx:100785595 234.958