Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02919 ATGATGGTACTTGTGTTTTGGGTATTGTCTGACAATTCTATAATTGAACTTGCCATGTCAAAAACAGCAGGATCAATACTTGAAGCTACACTAAAAAGGGATCCTCATGAGTTTGAATTCATTCAGGCAGTCCAGGAAGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAATTCTCGATATGTTAATATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTTCGAGTTTCATGGGTGGATGATAGGGGTGAGACACATGTAAATCGAGGCTTTAGGGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGAGGTATTCGTTTTCATCCATCAATGAATTTAAGTATTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCGCCATACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGATACCTAGGGCCTGACAAGGACCTTCCATCAGAGGAAATGGGTGTTGGTACTCGAGAAATGGGATATCTTTTTGGACAGTATAGACGTCTCGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGGATCTTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGACTGGTTTTCTTTGCGCAGATCATGCTTGCTGACATGAATAAAGAACTTAAAGGATTAAGAGGATATTTGGTTGATGAGGATGGATTTGACTACATGAAAATATCATTTCTGAGAGACATCAAAGCTCAGCAAAGAAGTTTGCGAGACTATTCAAAAACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCATGGAGTGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACATAATGAAATTGATCAATCTGATGCCATTAACTTGAAGGTAGTTGTTCTTCTAACTTCTGAGAGATATATGGCTTTTGCCCTTCCTCTTCTTTCTGGTTCAAACATGCCTTGTACCCCTGACGCAGTTCAGATTTTCAGAAAAGCTAGTGTTCTCATTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTAGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCACCGGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTATAAAAGCTGCAACTGACTTTGGTTATCAAAAAGAAAGCCCTGAGGCTCTGGTGCATGGAGCAGTCATATCTGCCTTTCTAACCATTGCCCAAGCCATGACTGATCAAGGTTCTATATAG 1338 0.4111 MMVLVFWVLSDNSIIELAMSKTAGSILEATLKRDPHEFEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERMIVFRVSWVDDRGETHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQIMLADMNKELKGLRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDVAFACASHNEIDQSDAINLKVVVLLTSERYMAFALPLLSGSNMPCTPDAVQIFRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02919 445 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 13 248 - -
Vimu11g02919 445 FunFam Glutamate dehydrogenase 69 204 - -
Vimu11g02919 445 PIRSF Glu_DH 246 445 IPR014362 GO:0016639
Vimu11g02919 445 PIRSF Glu_DH 38 252 IPR014362 GO:0016639
Vimu11g02919 445 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 248 443 IPR006096 GO:0006520|GO:0016491
Vimu11g02919 445 SMART ELFV_dehydrog_3 218 443 IPR006096 GO:0006520|GO:0016491
Vimu11g02919 445 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 217 443 IPR036291 -
Vimu11g02919 445 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 71 198 IPR006097 GO:0006520|GO:0016491
Vimu11g02919 445 Gene3D Glutamate Dehydrogenase, chain A, domain 3 16 70 - -
Vimu11g02919 445 Gene3D Leucine Dehydrogenase, chain A, domain 1 71 204 - -
Vimu11g02919 445 Gene3D - 216 445 - -
Vimu11g02919 445 FunFam NADP-specific glutamate dehydrogenase 25 68 - -
Vimu11g02919 445 FunFam NADP-specific glutamate dehydrogenase 375 445 - -
Vimu11g02919 445 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 25 210 IPR046346 -
Vimu11g02919 445 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 207 229 IPR006095 GO:0006520|GO:0016491
Vimu11g02919 445 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 128 142 IPR006095 GO:0006520|GO:0016491
Vimu11g02919 445 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 365 376 IPR006095 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02919 Vimu-Chr11 48979143 48986085 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02919 46 247 EF-hand Containing Proteins AT5G07440 32.039 2.66e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02919 K00262 - gmx:100788009 770.77