Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02910 ATGGATCAGTTCTTAAAAAGATGCTTTTACCATTCTGGTCAATATAACTCTGAGGAGCACTTTTCAGAATTGGATATCAAGCTGAAAGAGAAAGAGGGTGGAAAATTATCAAACAGATTGTTTTATTTGTCAATACCACCAAACATATTTGTGGATGTGGTGAGATGCGCTAGCCAAAAGGCTTCTTCCAGAGATGGATGGACAAGGGTTATTGTTGAAAAGCCATTTGGTCGTGACTCGGAATCATCTAGTGAGCTAACAAAATGCTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATTGACCATTACTTGGGTAAGGAGCTTGTGGAGAATCTATCAGTGCTTCGCTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGAATTACATTCGCAATGTGCAGATCATATTTTCTGAAGATTTTGGAACTGAAGGAAGAGGAGGTTATTTTGATCACTACGGAATCATTCGGGATATAATGCAAAATCATCTTCTGCAAATACTAGCTTTGTTTGCAATGGAAACACCAGTCAGCTTAGCTGCTGAGGACATCAGAAATGAAAAGGTGAAGGTTCTGAGATCAATGAGACCACTGCAGCTTGAAAATGTTGTTGTTGGTCAATACAAGGGCCACAACAAGGGTGGAAAATCATATCCTGCTTATACGGATGATGCAACTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCAGCAGCAGCTCTTTTTATAGACAATGCCAGATGGGATGGAGTTCCTTTTCTGATGAAAGCTGGCAAGGCTCTCCATACTAAACGAGTACAATTCAGACACGTCCCAGGTAACTTGTACAAGAGGAATTTTGGAACTGATCTAGACAAGGCTACGAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAAATCAACAATAAAGTGCCAGGTCTGGGAATGAGATTAGACAGAAGTGACTTGAATTTGCTTTTCCGAGCAAGGTATCCAAGTGAAATACCAGATGCATATGAGAGGTTACTCCTAGATGCCATTGAAGGAGAGCGAAGGCTGTTCATTAGAAGTGATGAGCTTGATGCAGCTTGGTCACTGTTCACTCCTTTGCTAAAAGAACTTGAAAACAAGAAGATTGCTCCAGAGCTCTACCCCTATGGTAGCAGAGGACCGGTTGGAGCACATTACCTTGCTGCAAGGCACAATGTTAGATGGGGAGATCTTGGTAATGAAGACTAA 1242 0.413 MDQFLKRCFYHSGQYNSEEHFSELDIKLKEKEGGKLSNRLFYLSIPPNIFVDVVRCASQKASSRDGWTRVIVEKPFGRDSESSSELTKCLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQIIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLAAEDIRNEKVKVLRSMRPLQLENVVVGQYKGHNKGGKSYPAYTDDATVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLFRARYPSEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPLLKELENKKIAPELYPYGSRGPVGAHYLAARHNVRWGDLGNED 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02910 413 NCBIfam glucose-6-phosphate dehydrogenase 1 407 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 PRINTS Glucose-6-phosphate dehydrogenase signature 69 82 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 PRINTS Glucose-6-phosphate dehydrogenase signature 145 162 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 PRINTS Glucose-6-phosphate dehydrogenase signature 93 121 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 PRINTS Glucose-6-phosphate dehydrogenase signature 163 179 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 PRINTS Glucose-6-phosphate dehydrogenase signature 250 276 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 Gene3D Dihydrodipicolinate Reductase; domain 2 102 407 - -
Vimu11g02910 413 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 1 406 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 FunFam Glucose-6-phosphate 1-dehydrogenase 102 407 - -
Vimu11g02910 413 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 1 408 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 116 406 IPR022675 GO:0004345|GO:0006006|GO:0050661
Vimu11g02910 413 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 1 113 IPR022674 GO:0006006|GO:0016614|GO:0050661
Vimu11g02910 413 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 103 406 - -
Vimu11g02910 413 Gene3D - 1 101 - -
Vimu11g02910 413 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 103 109 IPR019796 GO:0004345|GO:0006006
Vimu11g02910 413 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 116 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02910 Vimu-Chr11 48928112 48933437 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02910 K00036 - gmx:100801945 800.431