Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02900 ATGAATACGAAGTTGTGTGTTTTGTTTGTTTTTGCTTTTGTAACATGGCCATGCCAAGGTTCAGACTACCAAGTTTTCCCTCTCCGAATGAAAACTGGCTACAATGAGCAATACCCAACAGAGGTATCATGCGCAAGCTGGAGACTTGGCGTGGAGGCGAACAACCTCGTCAAATGGAAAACTGTCCCTGCGCCATGCCAAGAACACGTAGCAGACTATCTTCTCGGCGACCAATATAGATCAGACTCCAAAACCGTTTGCCGTGAGGCTTACTTTTATGCTAAAACTCTCAACATCACTCAAAAAGACATCTTTGTCTTTGACGTCGATGACACTGCTCTCTCAAATCTTCAATATTTTGCTAACCATGGTTTTGGGGTGGAAGAACATAATGCTACGGCTTTCAAGATCTGGGTTTCCTACGGTGAGGCATTTGCACTGCCCGAGACTCTTAAACTGTACAACAAACTGCTGGCTCTTGGGATCAAAGTTGTGTTCATCACAGAAAGACCACTGGATCTGAAGGATGTGACTGTTTCCAACTTGCAGAATGTTGGATTCTACAAATGGGACAAGTTGATTGCCAGGGATCCATCCATATACTCTGGTAAATTATCGAATGCTTTTAAATCTTCTGAGAGATCGAAGCTGGCTGAAGAGGGATACAGAATCGTTGGAAACATTGGAGATCAATGGAGTGATATTGTGGGAGATAAAAGAGGGTTTAGGACCTTTAAACTGCCAAATCCCTTGTACTATGATTGA 765 0.4314 MNTKLCVLFVFAFVTWPCQGSDYQVFPLRMKTGYNEQYPTEVSCASWRLGVEANNLVKWKTVPAPCQEHVADYLLGDQYRSDSKTVCREAYFYAKTLNITQKDIFVFDVDDTALSNLQYFANHGFGVEEHNATAFKIWVSYGEAFALPETLKLYNKLLALGIKVVFITERPLDLKDVTVSNLQNVGFYKWDKLIARDPSIYSGKLSNAFKSSERSKLAEEGYRIVGNIGDQWSDIVGDKRGFRTFKLPNPLYYD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02900 254 PIRSF VSP 1 253 IPR014403 -
Vimu11g02900 254 Gene3D - 40 254 IPR023214 -
Vimu11g02900 254 SUPERFAMILY HAD-like 101 250 IPR036412 -
Vimu11g02900 254 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 7 253 - -
Vimu11g02900 254 CDD HAD_VSP 70 254 - -
Vimu11g02900 254 NCBIfam plant acid phosphatase 39 253 IPR010028 GO:0003993
Vimu11g02900 254 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 31 253 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02900 Vimu-Chr11 48870563 48871521 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02900 - - gmx:100795218 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02900 11 48870563 48871521 Vimu11g02900 11 48870563 48871521 ECH