Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02899 ATGAAGTTCCTGGTGTTCTTCGTTGCTACATTTTTGGTGGCATCTCAATGCCATGGCGCTTCTTTCCGAAGCTTCCCTCTCCGAATGTCAACCGGTTATGGCGCTGATCCGAGTGACGACGACGTAAGATGCGCCAGTTGGAGACTCGCCGTGGAAGCACAAAACATCTTTGGCTTTGAAACAATTCCTGAACAGTGCGTAGACTCTACAGCAGCCTACATCGAAGGAGGACAATACCAATCAGACTCCAAAACCGTTAACCAACAAGTTTTCTTTTACGCCAGTGATCTCAAAATCCAAGACAACGATGTAGTTATCTTCAACGTAGATGGAACCGTACTCTCCAATATCCCATATTATTCTCAGCATGGATATGGATCGGAGAAATTCAATTCTACACGTTATGACGAAGAGTTTGTTAACAAGGGTGATGCACCAGCATTGCCTGAGACTCTTAAGAATTACAACAAACTTCTGGATCTTGGAGTCAAGATTGTCTTCTTGACTGGAAGACTGACTGACAAAAAGGCTGTAACTGAAGCCAACTTGAGGAAAGCTGGTTTCCACACATGGGAGAAGTTGATTCTCAAGGAGCCATCAAACGGTCAAAATTCAGTTGAATACAAATCAACTGAGAGAGCGAAGCTGGTGCAGCAGGGTTACAGAATCATTGCAAATGTTGCAGACCAGTGGAGCAGTTTGAAAGGAGGAAACCAAGGCCTCAGGAGCTTTAAGCTGCCTAATCCCTTGTACTACATTGAGTAG 765 0.4458 MKFLVFFVATFLVASQCHGASFRSFPLRMSTGYGADPSDDDVRCASWRLAVEAQNIFGFETIPEQCVDSTAAYIEGGQYQSDSKTVNQQVFFYASDLKIQDNDVVIFNVDGTVLSNIPYYSQHGYGSEKFNSTRYDEEFVNKGDAPALPETLKNYNKLLDLGVKIVFLTGRLTDKKAVTEANLRKAGFHTWEKLILKEPSNGQNSVEYKSTERAKLVQQGYRIIANVADQWSSLKGGNQGLRSFKLPNPLYYIE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02899 254 Gene3D - 40 254 IPR023214 -
Vimu11g02899 254 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 5 253 - -
Vimu11g02899 254 SUPERFAMILY HAD-like 92 237 IPR036412 -
Vimu11g02899 254 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 29 253 IPR005519 -
Vimu11g02899 254 CDD HAD_VSP 70 253 - -
Vimu11g02899 254 PIRSF VSP 1 254 IPR014403 -
Vimu11g02899 254 NCBIfam vegetative storage protein 2 250 IPR011267 GO:0045735
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02899 Vimu-Chr11 48858352 48859313 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02899 - - vra:106773916 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02899 11 48858352 48859313 Vimu11g02899 11 48858352 48859313 ECH