Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02897 ATGAATAAGGAGAGAATGAAGGTGTTTGGTTTTGTTGTTGCTATAGCTGTAGCAGCATGGCAGTGTCATGGTTCAGAGCATGGTGCAAGCATCCAGATTTTCCCTCTGCGAATGAAAACTGGTCATGGTGGCCGATACATTCCAGAGGTTTCTTGCCAAAGTTGGAGGGTTGGTGTGGAAGCACACAACCTGATTGATTGGAAAACTGTTCCTTTGGATTGTGAGGGTTACATTGGAAACTATATGCTTGGTCGCCAATATAGATCAGACTCCATAACTGTTTGCCGTGAAGCTTATATTTATGCCAAAACCCTAAATATCACTGCCAAAGACATCTGGGTCTTTGATGTAGACGAAACCACACTGTCTAATCTACCTTATTATGCTCAACATGGATTTGGGGTGGAACCATATAATTCGACATTGTTTAATGAATGGGTTGATCTCGGTGAGGCACCAGCACTGCCTGAGAGTCTCGGACTGTACAAGAAATTGTTGTCGCTTGGCATCAAGATTGTGTTCTTGACAGGAAGACCACTGGAACAGAAGGCTGTCACAGTTTCCAACTTAAAGATTGCAGGATACCACAAATGGGAGAAGATTATCGTAAAGTGTGTTTCTTTTCACTATAAAATTTCCATAATTTTCCATGATTAG 657 0.4186 MNKERMKVFGFVVAIAVAAWQCHGSEHGASIQIFPLRMKTGHGGRYIPEVSCQSWRVGVEAHNLIDWKTVPLDCEGYIGNYMLGRQYRSDSITVCREAYIYAKTLNITAKDIWVFDVDETTLSNLPYYAQHGFGVEPYNSTLFNEWVDLGEAPALPESLGLYKKLLSLGIKIVFLTGRPLEQKAVTVSNLKIAGYHKWEKIIVKCVSFHYKISIIFHD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02897 218 PIRSF VSP 3 213 IPR014403 -
Vimu11g02897 218 SUPERFAMILY HAD-like 103 200 IPR036412 -
Vimu11g02897 218 Gene3D - 47 213 IPR023214 -
Vimu11g02897 218 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 13 204 - -
Vimu11g02897 218 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 45 204 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02897 Vimu-Chr11 48812805 48814785 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02897 - - gmx:547669 334.724