Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02893 ATGATATTACCAAGGGAAACACTTGGTTGCCCATCGTCAAAGCAAAATGAGGAAGGTGGTGCTGTGTGCGACGCTGATCGGAGCCGCGACGGCCTGCGCCGTGGGTGCGGTGGCGGTGCAGAGGTACGTCAGGAAATGCCGACGGAATTAGAGGAGAAGTGTGCGACGCCGACGTGGAAGCTGAAGCGCATTGCGGATGCCATGAACGTGGAGATGCACGCCGGCCTTGCTTCCGAAGGTGGTAGCAAGCTCAAGATGCTCATCACCTACGTTGATAAGCTCCCAACTGGGAATGAGGAAGGACTATATTATGCCGTGGATCTTGGAGGGACTAATTTTCGGGTGTTACGTGTGCAATTGGGAGGCAAGGAAGGAGGTATCGTTAGTCAAGAATTTACTGAGGTCTCAATTCCTCCTGATTTGATGGTTGGAACATCAACTGCACTCTTTGACTATATTGCAGCAGAAGTTGGAAAATTTGTTGCCCAAGAGAGTGAAGATTTTAAAGTTCCTCCAGGTAGACAGAGAGAGATAGGTTTTACCTTTTCCTTTCCTGTCATGCAAACGTTAATTGCTTCTGGGAACCTTATCAAGTGGACAAAAGGCTTCAACATAGAGGACGCTGTTGGTAAAGATGTTGTGGAAGAACTGATGAAAGCCATTCGGAAACAAGGTCTTGATATGCGTGTAAATGCTCTGGTCAATGATACAGTTGGAACATTAGCAGGAGGTCGATATACACACAACAATGTCATTGCTGCTGTTATTTTAGGAACTGGAACAAATGCTGCATATGTAGAGCGTGTTCAAGCAATACCAAAATGGCATGGTCCTTTGCCAGATTCTGGAGAGATGGTTATCAACATGGAGTGGGGAAACTTTAGGTCATCATACCTTCCATTAACTGAGTATGATCATGCCCTAGATGCTGAGAGTTTAAACCCTGGTGAACAGATTTTTGAGAAGATAATTTCTGGCATGTACTTGGGAGAAATTGTTCGTAAAGTACTATGTAAAATGGCCGAAGAAGCTTTACTTTTTGGTGAGAATGTTACCCCAAAACTAAAAGATCCGTTCATATTCAGGTATAATGTCAGGACACCTGACATGTCTGCAATGCATCATGATTCCTCTGCCGATCTCAACGTGGTAGGAAGCAAACTGAAAAATATTTTCGAGATATCTGATAGCTCCCTAGAAGTGAGGAAGGTGGTTGTGGAGATCTGCAATATTGTTGCTACCCGTGGTGCTCGTCTTGCTGCTGCTGGGATCTTAGGTATCTTGAAGAAGATGGGAAAAGACAGTATGAGTGATGTTAAGGGTGAGAAGAATGTGATAGCCATGGATGGTGGATTGTATGAGCACTACACTGAGTATAGCAAGTGCTTAGAGAATACCCTTAAAGGATTGGTTGGTGAAGATGCCTCAGAAAGTATCATCATTGAGCATTCCAATGATGGTTCAGGAATTGGTGCTGCCCTACTTGCAGCCTCAGTGTCCCAGTAA 1506 0.4495 MILPRETLGCPSSKQNEEGGAVCDADRSRDGLRRGCGGGAEVRQEMPTELEEKCATPTWKLKRIADAMNVEMHAGLASEGGSKLKMLITYVDKLPTGNEEGLYYAVDLGGTNFRVLRVQLGGKEGGIVSQEFTEVSIPPDLMVGTSTALFDYIAAEVGKFVAQESEDFKVPPGRQREIGFTFSFPVMQTLIASGNLIKWTKGFNIEDAVGKDVVEELMKAIRKQGLDMRVNALVNDTVGTLAGGRYTHNNVIAAVILGTGTNAAYVERVQAIPKWHGPLPDSGEMVINMEWGNFRSSYLPLTEYDHALDAESLNPGEQIFEKIISGMYLGEIVRKVLCKMAEEALLFGENVTPKLKDPFIFRYNVRTPDMSAMHHDSSADLNVVGSKLKNIFEISDSSLEVRKVVVEICNIVATRGARLAAAGILGILKKMGKDSMSDVKGEKNVIAMDGGLYEHYTEYSKCLENTLKGLVGEDASESIIIEHSNDGSGIGAALLAASVSQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02893 501 ProSiteProfiles Hexokinase domain profile. 41 497 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Vimu11g02893 501 PRINTS Hexokinase family signature 405 427 - -
Vimu11g02893 501 PRINTS Hexokinase family signature 178 203 - -
Vimu11g02893 501 PRINTS Hexokinase family signature 230 246 - -
Vimu11g02893 501 PRINTS Hexokinase family signature 482 498 - -
Vimu11g02893 501 PRINTS Hexokinase family signature 253 267 - -
Vimu11g02893 501 PRINTS Hexokinase family signature 104 120 - -
Vimu11g02893 501 PRINTS Hexokinase family signature 318 340 - -
Vimu11g02893 501 FunFam Phosphotransferase 89 257 - -
Vimu11g02893 501 CDD NBD_sugar-kinase_HSP70_actin 105 267 - -
Vimu11g02893 501 Pfam Hexokinase 49 246 IPR022672 GO:0005524|GO:0005975|GO:0016773
Vimu11g02893 501 SUPERFAMILY Actin-like ATPase domain 46 248 IPR043129 -
Vimu11g02893 501 PANTHER HEXOKINASE 44 499 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Vimu11g02893 501 MobiDBLite consensus disorder prediction 1 26 - -
Vimu11g02893 501 Gene3D - 89 496 - -
Vimu11g02893 501 Pfam Hexokinase 253 497 IPR022673 GO:0005524|GO:0005975|GO:0016773
Vimu11g02893 501 Gene3D - 67 485 - -
Vimu11g02893 501 FunFam Phosphotransferase 227 485 - -
Vimu11g02893 501 SUPERFAMILY Actin-like ATPase domain 251 499 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02893 Vimu-Chr11 48780818 48785501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02893 K00844 - gmx:100783775 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02893 11 48780818 48785501 Vimu11g02893 11 48780818 48785501 ECH