Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02890 ATGGCCTCATACAGGCCCTTCCCTCCTCAATCGAGTCAAATTCAAAACCCTATTCCAAGTGGGAATCATCAGTATACTAATAATAATCAAAATTGGGGTGCTTACGGAGATCCCTCTAATGCTTCATTTCCCCAAATCCCTCCAAATTCCAATTATCACCATCAGCAACAACAACATCATGCTCCGTATGCACCTCCGAATCCCCATCACCCTCGCTATCCATATCCACCACCTCCTCCACCGCCACCGGAGGCTTCATACCAGCCTCCGCCGCCGCCACCTCCTCCCGTCTACTATCCCTCTAATAGCCAGTATAGCAACCAGCCACCTCCGCCGCCGCCGCCGTCGTCGCCACCCCCACCACCCCCTCCTGTTTCACCCCCTCCTCCTCCCCCGGCAACTCAGAACAATGAAGAGCGGCGCTTCAAGGACCCTTCCACGTCCGGCCGCCGCGAATATGATCCTTCCAATCACGGCATTGCTCACAAGCAGCACAAGCACCAGCCTCCCGTGCCAGCAAAAAAGGTGAATGGGCCTCCTGGCAGAACTGAGACGGAGGAAGAAAAGAGGTTGAGGAAGAAGAGGGAGTTTGAGAAGCAGAGGCAGGAGGAAAAGCATAGGCAGCAGCTCAAGGAGTCCCAGAACACTGTTCTGCAGAAGACTCACCTGTTGTCGTCTGGGAAGGGGCATGGCATGATTGCAGGGTCTCGATTGGGAGAAAGGAGATCCACTCCATTGTTGAGTGCCGAGAGGGTGGAAAATAGGTTGAAGAAGCCCACAACATTTTTGTGTAAGCTCAAATTTCGAAATGAACTTCCAGATCCAAGTGCTCAACCTAAGCTTATGGCTTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCCCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCAGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAATGTCAGACAACCTCTTGCTCCAGAAGATGAAGAACTGTTGCGGGATGATGAAGCTGCTACACCAATTAAAAAAGATGGCATAAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTAGCGTGGCTTGTCAAAACACAATATATATCTCCTCTAAGCATGGAGTCCACAAAACAGTCTTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGATGAAGGGAGGCCGTGGCATTTTGGACAATCTAAACAGTAGGGAAAGACAAATTAGGGAAATTGAAGCATCGTTTGAAGCAGCTAAGTCTGATCCTGTTCATGCAACGAACAAGGATTTGTATCCTGTTGAGGTTATGCCATTACTGCCCGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCCACAGCCGATTCAGAAATGTATGCTAAGTTGGACAAATCTGTTCGTGACGCCTTTGAATCAAAGGCAGTTATGAAGAGTTACGTTGCAACGAGTTCAGATCCTGCTAATCCTGAAAAGTTTTTGGCATATATGGCCCCAGCACCAGGAGAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCGTACTCTTGGATTCGCGAGTATCATTGGGATGTTCGGGGTGATGATGCAGACGATCCTACAACATTCTTGGTTGCATTTGATGATTCAGAAGCACGTTACTTGCCTCTTCCGACTAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAGGAGAAGAGGTTGAGCAATGTCCAGTACCTTCAAGAGTGACTGTAAGAAGGAGGTCTAGTGTCGCTGCGATTGAGCGGAAGGATACTGAGGTTTATACAAGTTCAAGGGGCAATTCCTCAAAGAGAGCTCGTCTAGACATGGATGATGGTCTAGAACACCAACATAGAGGTGCTTCACATCAGGACAACTATCAGTCTAGTGGAGCTGAAGATTACATGTCTGAGTGA 1971 0.4688 MASYRPFPPQSSQIQNPIPSGNHQYTNNNQNWGAYGDPSNASFPQIPPNSNYHHQQQQHHAPYAPPNPHHPRYPYPPPPPPPPEASYQPPPPPPPPVYYPSNSQYSNQPPPPPPPSSPPPPPPPVSPPPPPPATQNNEERRFKDPSTSGRREYDPSNHGIAHKQHKHQPPVPAKKVNGPPGRTETEEEKRLRKKREFEKQRQEEKHRQQLKESQNTVLQKTHLLSSGKGHGMIAGSRLGERRSTPLLSAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPNVRQPLAPEDEELLRDDEAATPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRGILDNLNSRERQIREIEASFEAAKSDPVHATNKDLYPVEVMPLLPDFDRYDDQFVVAAFDNAPTADSEMYAKLDKSVRDAFESKAVMKSYVATSSDPANPEKFLAYMAPAPGELSKDIYDENEDVSYSWIREYHWDVRGDDADDPTTFLVAFDDSEARYLPLPTKLVLRKKRAKEGRSGEEVEQCPVPSRVTVRRRSSVAAIERKDTEVYTSSRGNSSKRARLDMDDGLEHQHRGASHQDNYQSSGAEDYMSE 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02890 656 SUPERFAMILY Formin homology 2 domain (FH2 domain) 110 247 - -
Vimu11g02890 656 MobiDBLite consensus disorder prediction 641 656 - -
Vimu11g02890 656 MobiDBLite consensus disorder prediction 622 640 - -
Vimu11g02890 656 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 232 656 IPR007133 GO:0006368|GO:0016570|GO:0016593
Vimu11g02890 656 MobiDBLite consensus disorder prediction 64 135 - -
Vimu11g02890 656 MobiDBLite consensus disorder prediction 180 211 - -
Vimu11g02890 656 MobiDBLite consensus disorder prediction 137 161 - -
Vimu11g02890 656 Coils Coil 409 429 - -
Vimu11g02890 656 MobiDBLite consensus disorder prediction 607 656 - -
Vimu11g02890 656 PRINTS Proline rich extensin signature 92 109 - -
Vimu11g02890 656 PRINTS Proline rich extensin signature 111 136 - -
Vimu11g02890 656 PRINTS Proline rich extensin signature 74 90 - -
Vimu11g02890 656 MobiDBLite consensus disorder prediction 1 252 - -
Vimu11g02890 656 Pfam Paf1 262 611 IPR007133 GO:0006368|GO:0016570|GO:0016593
Vimu11g02890 656 MobiDBLite consensus disorder prediction 1 62 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02890 K15174 - gmx:100800148 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02890 11 48753914 48757382 Vimu11g02890 11 48753914 48757382 ECH