Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02879 ATGGCACCCCATGGAGAGTCTCTGGCTAGCTCTTTCTCTAGGAAAAGCAACATGTCAAAGCCACCAAAGCTTGCATCAGAGAACCTTCAACGAACGGTCTCAGACATCTCTTTTGAGCTGAGCAAAGAAGAGATCGATGAGTTGAAGCTGCCGGCAATATCTGAGGTTGAGAATGCCAAGTGTGAGTGCTGTGGGATGTGTGAGGAGTGCACACCGGAGTACATCGACCGTGTGCGTGAGAAGTTCAACGGGAAGTGGGTGTGTGGGTTGTGTTCTGAGGCAGTGAAAGAAGAGTTGGAGAAAAATGGCGGAGAAAAGGAAGAAGCTTTGAGTGCACACATGAATGCATGTGTTAGGTTCAACAAATATGGTAGGGCTTTCCCTGTTCTGTTCCAAGCACAGGCCATGAAAGAGATGCTCAAAAAGAACACCATAGATGGTAGAAGGGCCAAATCCATTAGCCCTAGGGACAAAGGAGGCCCTAAGAAAGGAGGAATTGCTCGTAGCTCTAGTTGCATTCCAGCACTTACAAGAGAGATCAATGATATCAAAATAGCCAATTAA 564 0.4681 MAPHGESLASSFSRKSNMSKPPKLASENLQRTVSDISFELSKEEIDELKLPAISEVENAKCECCGMCEECTPEYIDRVREKFNGKWVCGLCSEAVKEELEKNGGEKEEALSAHMNACVRFNKYGRAFPVLFQAQAMKEMLKKNTIDGRRAKSISPRDKGGPKKGGIARSSSCIPALTREINDIKIAN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02879 187 Pfam Protein of unknown function (DUF1677) 56 142 IPR012876 -
Vimu11g02879 187 PANTHER OS01G0745000 PROTEIN 49 179 IPR012876 -
Vimu11g02879 187 MobiDBLite consensus disorder prediction 9 28 - -
Vimu11g02879 187 MobiDBLite consensus disorder prediction 146 163 - -
Vimu11g02879 187 MobiDBLite consensus disorder prediction 1 28 - -
Vimu11g02879 187 MobiDBLite consensus disorder prediction 146 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02879 Vimu-Chr11 48678380 48679656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02879 - - gmx:100526996 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02879 11 48678380 48679656 Vimu11g02879 11 48678380 48679656 ECH