Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02875 ATGGTGAGTGACCAAAGAATAGCAGAGGAGACCCTGCAGGAGTCCAAGGTGGCTGCTTTGGAGACCAGTGGCACAATGAGCGGACCCCTCGTCGGAGCCTCCACCAGGACCCGCCGCCGCCAGAGGGTGGAGGCTATGCAACTGGTTCTGAGACTGTTGTGCATGGCCTCCTCTGTTGCTTCAATCTCGCTCATGGTCACTGCTAAGGAATCTAGTTCTGTCAGTATTTATGGCTTTCAATTACCTCTTCACTCCAAATGGTCTTTCTCTGAGTCATACGAGTATCTTGTTGGGGTTTCTGCTGCTGTTGCAGCTCATTCCTTGCTCCAACTACTCATTGGCATATCCAGATTTCTTAGGACTTCTTCTGTGATACCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGTATTTGCATATGCATTGATGAGTGCTGGATCTGCTGCATCTGGGGTGACCAATCTGAATCGCACAGGAATTAGACACACGGCTCTGCCAAATTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGGGATCTCAATAGCTTTCACTTTCACCAGCTGCTTTTTGCTGGCTACATCTGCTGTCCAAGATGTAATATGGCTCTCCCAACACTGA 633 0.485 MVSDQRIAEETLQESKVAALETSGTMSGPLVGASTRTRRRQRVEAMQLVLRLLCMASSVASISLMVTAKESSSVSIYGFQLPLHSKWSFSESYEYLVGVSAAVAAHSLLQLLIGISRFLRTSSVIPSRNHAWLIFAGDQVFAYALMSAGSAASGVTNLNRTGIRHTALPNFCKPLHKFCDHVGISIAFTFTSCFLLATSAVQDVIWLSQH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02875 210 PANTHER CASP-LIKE PROTEIN 4A4 27 205 - -
Vimu11g02875 210 NCBIfam plant integral membrane protein TIGR01569 48 198 IPR006459 -
Vimu11g02875 210 Pfam Casparian strip membrane protein domain 42 194 IPR006702 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02875 32 210 Miscellaneous Gene Families AT3G16300 50.279 4.89e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02875 - - pvu:PHAVU_010G146500g 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02875 11 48642987 48644634 Vimu11g02875 11 48642987 48644634 ECH