Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02858 ATGGTCGAGAAAGAGAAGAAGGATCCTTGTTTTGAGGATGTTCAGAAATGGATAAAAGGTCTGTCAGATGGAACTTATGGTCATCAGATAGAGACTTCCACCATGAGGGGTATTCAGCTTCTAAAAGCACAAAAAGGTTTTCTTCTTTGTAACATGATCATACACACTGGCTTGTTGGATGAAAGTGGAAACTGGCATGTGAGTGCAATAGCAACATTAGTAGACATGATTGGAAGTGCTGCACCTTACACAGTTAACCAATGTCACCATGTCACTCTTGACTTGAACATCTCATACTACACAATGGCAAAGGTTCAGGAAGAGGTTGAAATAGAAGCAAAGGTTGTAGGAAAGAAGGATGATTTAACTTCAGTGATTGTGGAAGTCAGGAAAAAGCAGAATGCAGAATTGGTTGCTCTAGGGAAACTGTGGATGGCAGTATCTACAAAGAATCCAAAATACCAACCCAGTGAACTCTAA 480 0.4021 MVEKEKKDPCFEDVQKWIKGLSDGTYGHQIETSTMRGIQLLKAQKGFLLCNMIIHTGLLDESGNWHVSAIATLVDMIGSAAPYTVNQCHHVTLDLNISYYTMAKVQEEVEIEAKVVGKKDDLTSVIVEVRKKQNAELVALGKLWMAVSTKNPKYQPSEL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02858 159 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 5 144 IPR039298 GO:0047617
Vimu11g02858 159 CDD PaaI_thioesterase 37 147 - -
Vimu11g02858 159 Pfam Thioesterase superfamily 63 136 IPR006683 -
Vimu11g02858 159 Gene3D Hotdog Thioesterase 10 153 - -
Vimu11g02858 159 FunFam Acyl-coenzyme A thioesterase 13 12 150 - -
Vimu11g02858 159 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 34 145 IPR029069 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02858 K17362 - gmx:100809050 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02858 11 48527437 48528235 Vimu11g02858 11 48527437 48528235 ECH