Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02849 ATGGTCAAAGCAATGGAACAAGAACAGGAAGGTGGCAGGTCCAAACTATTCAATTTCAAAGGAATTTTTGACACTGGGAGGCATGCAAAGAGTTTGAGCGTTGAGAGTGCCACCACATTAGATCCTGCTGCTGCTGCTGCTTCGGAGGAAGATCCAGTGTCATCAAAAAGTCAGGGATCAAAACCTCAAAATGATCAAGACAAGGCTCCTAAGCCAAGGGTGAACAAGGAGGAAACTATAGCCAAAGAAAAACTGCTGCAAGAAATGGAACAGATGAAGGAGAGATTTGCTAAACTCCTGTTGGGGGAGGATATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTCACAAATCTTGCAGCTGCTGTTTTTGGAGAGCAAAAGCGCCTAGAGCCAATGCCGCCAGAAAGGAAGGCAAGATGGAGAAAAGAAATCGATTGGCTTCTATCAGTCACCGATTACATTGTTGAAATGGTTCCTGTGCAACAAAAAAACAAGGATGGCACAGTCATGGAGGTCATGACCACACGACAGAGAACTGATCTCCACATGAATATCCCTGCCTTGCGAAAGCTTGATACTATGCTTATTGACAGTCTGGATAACTTCAAAGACCAAAATGAGTTCTATTATGTATCAAGAGATGCAGATGACCCAGATAACAGAAAAAACGATAACAAGTGGTGGTTGCCTACACCTAAGGTTCCTCCGGAGGGTCTATCTGAGTCAGCAAGAAGGTTTGTTCAGTATCAGAAAGATTGTGTGAACCAAGTTCTAAAAGCAGCTATGGCCATAAATGCTCAAACTCTATCAGAAATGGAGATCCCTGAAAGTTATATTGAATCCTTGCCCAAGGCAAGTCAAAAGAAACAAAATGGAAGATCAAGTCTTGGGGACATGATATACAGGAGCATCACAGAAGAATTTTTTGATCCTGATCAGCTCCTAGCATCTATGGACATGTCATCAGAACACAAAATCCTAGATCTCAAGGACAGAATCGAGGCATCCATTGTAATTTGGAGGCGGAAGATGAACCAAAAAGATTGTAAATCATCTTGGGGTTCTGCAGTGAGTATTGAGAAGAGAGAACTCTTTGAAGAGAGAGCAGAAACTATCTTACTTCTCCTAAAGCATCGCTTTCCAGGAATTCCTCAATCTGCATTGGATATAAGCAAAATCCAATACAATGGGGATGTGGGGCAAGCTGTTCTTGAAAGTTATTCAAGGATATTGGAGAGTTTAGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTCCACGCAGATTACCTCACTCAAAATCCACCACCATCAAGTAGAAAAAGTGTTTCGAGAAACATAAATTCCAAGTCAGAAAAGTCTCCAACTCCTAAAGAAGAGGTGGAAAAGGGTAGCTCAGAAACAATGACACTATCAGATTTCATGGGTTGGAACAGTGATCAAGGTGAATCAGACCTTAAGAAAGACCCCTCGGATGATTTCTACAATGAAACGGATAATGGAAAGCCCCAGAAACTTCCAGAGATAGTGACCGACAAGAAAGTGTCCTACCTTGAGACATTGGGAGGCATGAGAAGTCCAACAGCACGCCATTAA 1617 0.4242 MVKAMEQEQEGGRSKLFNFKGIFDTGRHAKSLSVESATTLDPAAAAASEEDPVSSKSQGSKPQNDQDKAPKPRVNKEETIAKEKLLQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGTVMEVMTTRQRTDLHMNIPALRKLDTMLIDSLDNFKDQNEFYYVSRDADDPDNRKNDNKWWLPTPKVPPEGLSESARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKASQKKQNGRSSLGDMIYRSITEEFFDPDQLLASMDMSSEHKILDLKDRIEASIVIWRRKMNQKDCKSSWGSAVSIEKRELFEERAETILLLLKHRFPGIPQSALDISKIQYNGDVGQAVLESYSRILESLAFTVLSRIEDVLHADYLTQNPPPSSRKSVSRNINSKSEKSPTPKEEVEKGSSETMTLSDFMGWNSDQGESDLKKDPSDDFYNETDNGKPQKLPEIVTDKKVSYLETLGGMRSPTARH 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02849 538 MobiDBLite consensus disorder prediction 489 506 - -
Vimu11g02849 538 FunFam Rop guanine nucleotide exchange factor 9 280 402 - -
Vimu11g02849 538 MobiDBLite consensus disorder prediction 40 78 - -
Vimu11g02849 538 MobiDBLite consensus disorder prediction 439 458 - -
Vimu11g02849 538 MobiDBLite consensus disorder prediction 459 473 - -
Vimu11g02849 538 FunFam Rop guanine nucleotide exchange factor 14 81 316 - -
Vimu11g02849 538 Coils Coil 75 102 - -
Vimu11g02849 538 MobiDBLite consensus disorder prediction 437 517 - -
Vimu11g02849 538 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 87 440 IPR005512 GO:0005085
Vimu11g02849 538 Gene3D PRONE domain, subdomain 2 280 402 - -
Vimu11g02849 538 Gene3D PRONE domain, subdomain 1 93 437 - -
Vimu11g02849 538 MobiDBLite consensus disorder prediction 51 65 - -
Vimu11g02849 538 ProSiteProfiles PRONE domain profile. 79 446 IPR005512 GO:0005085
Vimu11g02849 538 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 37 488 IPR038937 GO:0005085
Vimu11g02849 538 FunFam Rop guanine nucleotide exchange factor 14 318 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02849 Vimu-Chr11 48457242 48460015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02849 - - gmx:100777496 849.351