Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02847 ATGGAATCGATCGGAGTACTCCTCGTGGCTCGCGTGATGCCGTACCTGGAGCAGGAGCTCGACAAGCGCTTCAAGCTGTTCCGCGTGTGGGAGTACCCGAACCGGGCGCAGCTGCTGAGTCAGCATGCCGCCGCCATCCGTGCGGTGGTCGCAAGCTCGAGCGCCGGCGCGGATGCGGCGCTGATCGAGGCGCTGCCGAAGCTGGAGATCGTGTCGAGCTTCAGCGTGGGAGTAGATAAGATTGACAAGGAGAAGTGCAGAGAGAAGGGGATTCCCGTGACCTACACGCCGGACGTGTTGACCGACGAGGTCGCGGATCTCACTATTGGCTTGATGCTGGCGCTCCTCAGGAGGATTTGCGAGTGCGATCGCTTTGTCAGGAGCGGCCAGTGGAAGCGCGGTAACTACAAGTTGACCACTAAGGTTTGTTTGTTTCTGCATTCTCGTCATTCTTCTTCTCTCGCAATAGAAGTAGGTTACAGTGATTTTACACATTATGATATATCTACATTGACTTTCTTATCTATGCTTATACTACACCATTATTTTATCTAA 555 0.5369 MESIGVLLVARVMPYLEQELDKRFKLFRVWEYPNRAQLLSQHAAAIRAVVASSSAGADAALIEALPKLEIVSSFSVGVDKIDKEKCREKGIPVTYTPDVLTDEVADLTIGLMLALLRRICECDRFVRSGQWKRGNYKLTTKVCLFLHSRHSSSLAIEVGYSDFTHYDISTLTFLSMLILHHYFI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02847 184 Gene3D - 2 124 - -
Vimu11g02847 184 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 142 - -
Vimu11g02847 184 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 160 IPR006139 GO:0016616|GO:0051287
Vimu11g02847 184 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02847 Vimu-Chr11 48452196 48452750 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02847 - K18606 vra:106774153 253.832