Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02841 ATGCTTAGAAAACACAGAGTTCAACAAGAATTTAGAAATGAGGTATTTCAACAAAGACCCTTGGATATTGAAGATCTTGCAAATCTCGGAAGAACTATGGGAACTTGTCCATATTATGGCTCTAGAAGCATGGTTCGAAGAGCTGATCTTGTTGTCCTACCATATCAATCTCTTCTGTCAAAATCATCTCGTGATGCCCTCGGCCTGAATTTGAAATCCAATATTGTTATAATAGATGAGGCTCATAATTTAGCTGATTCACTCATCAACATGTATGACTCCAAAATTACTTTATCACAGGTATGA 306 0.366 MLRKHRVQQEFRNEVFQQRPLDIEDLANLGRTMGTCPYYGSRSMVRRADLVVLPYQSLLSKSSRDALGLNLKSNIVIIDEAHNLADSLINMYDSKITLSQV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02841 101 Pfam DEAD_2 10 100 IPR010614 GO:0003677|GO:0003678|GO:0005524
Vimu11g02841 101 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 6 101 IPR045028 -
Vimu11g02841 101 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 1 101 IPR014013 GO:0005524
Vimu11g02841 101 Gene3D - 1 101 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02841 Vimu-Chr11 48420364 48420669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02841 K11273 - gmx:106794132 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02841 11 48420364 48420669 Vimu11g02841 11 48420364 48420669 ECH