Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02833 ATGTTTCGGTGGCTATTGAAGCCCAGGTTCTATTCAAAATGCTTGTCTTACGTGAAGGCTTTGAAAATTCGGCTGGAGAGAATACAGAATAGGAAGAAAGCAGTGCTGAAGTTTTTGAAGAGTGACATCGCAGAGCTTCTAAGGCTTGGCCTCGAACACGATGCATATACAAGGGCTAATGGACTTCTGTTAGAGCAGAAAATGTTATCCTGCTACGAACTCGTTGAAAACTTTGTTGGGTGCATATCAGATCATGTTGAAGACCTAGCCAAGCAGAAGGATTGCCCTGATGAATGCAAGGAAGCTGTGCCATCATTGATATATGCTGCTGCAAGATTTGGTGATCTGCCAGAATTGCTTGAGCTCAGAACAATATTTACCGAAAAATATGGCAATTCTCTTGAACCTTATATAAACAAAGAGTTTGTTGAGAGGCTGAGGCAAGATCCACCTACAAGAGAAATGAAGATTGGACTATTATATGATATATCACAAGAATTCTCCATAGAATGGGATGACAAGTCTCTTAGAGAAAGACTTTATACACAGTCGTCATTACTTGAAGGGAAGACTGGAGAAGATTTCAATGGATCAAAAGGAAAGGAAAGAGTAGGAAGGAAGAATTTGAATGACGACTCATGGATTCATCAAAACAGTAGCAGTGATGATGAAACAAGTCTGTCATCTAATGATGGTAGAAAGGGTACCAGTTCAAGTTCATTGGGAAGCATATCTGAGGATGAAGTTGAAAAAGCTGAAACCAACAGGCCAATTTCTTCCTTTTGGCGCATTCCGCCTCCCTACCTCAAACAAAAGACCAACAAAAGTGATTCAAAGAAAACAACACATTCTGACACTGCAACAACACCAGATTCAGGTGGAATGAAGTCAGACAGAAAAAAACGTTACCCTTCTCAACAACCAGAACATGATACTGAGCAAACCAGAAGGCGTAGAAGCCCACATGTCAGAGGAAAATCTCTTCCTTCTGAATCCAACACTGCTGTGGAAACATCAAAAGGGCATATACGAACAATTTCCTTAGAATCTGGAATGCGGGGTGGTGCAAGGCGTGTGCATCCGAATCTACCCGATTATGATGATTTGAGAGCTCGTCTTTTAGCTCTTCGACAGAGATAA 1140 0.4123 MFRWLLKPRFYSKCLSYVKALKIRLERIQNRKKAVLKFLKSDIAELLRLGLEHDAYTRANGLLLEQKMLSCYELVENFVGCISDHVEDLAKQKDCPDECKEAVPSLIYAAARFGDLPELLELRTIFTEKYGNSLEPYINKEFVERLRQDPPTREMKIGLLYDISQEFSIEWDDKSLRERLYTQSSLLEGKTGEDFNGSKGKERVGRKNLNDDSWIHQNSSSDDETSLSSNDGRKGTSSSSLGSISEDEVEKAETNRPISSFWRIPPPYLKQKTNKSDSKKTTHSDTATTPDSGGMKSDRKKRYPSQQPEHDTEQTRRRRSPHVRGKSLPSESNTAVETSKGHIRTISLESGMRGGARRVHPNLPDYDDLRARLLALRQR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02833 379 MobiDBLite consensus disorder prediction 211 245 - -
Vimu11g02833 379 PANTHER IST1 FAMILY MEMBER 13 377 IPR005061 GO:0015031
Vimu11g02833 379 MobiDBLite consensus disorder prediction 194 210 - -
Vimu11g02833 379 Gene3D - 4 179 IPR042277 -
Vimu11g02833 379 FunFam Vacuolar protein sorting-associated protein IST1 6 179 - -
Vimu11g02833 379 Pfam Regulator of Vps4 activity in the MVB pathway 18 169 IPR005061 GO:0015031
Vimu11g02833 379 MobiDBLite consensus disorder prediction 294 318 - -
Vimu11g02833 379 MobiDBLite consensus disorder prediction 189 342 - -
Vimu11g02833 379 MobiDBLite consensus disorder prediction 326 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02833 Vimu-Chr11 48372345 48374527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02833 - - gmx:102665874 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02833 11 48372345 48374527 Vimu11g02833 11 48372345 48374527 ECH