Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02812 ATGGTTTTGGAGAGCATGGGTGTTGAGAAGTACTTGGAGGAGCATATGAACTCAACCAATTATCTCCTCAGGGTTATGAAATACAAAGCCCCTCAAACCACTGACACAAAGATAGGCCTCACCACACACTCAGATAAGAACACAGTGACCATTTTGTACCAAAATGGAGTGGAGGGTTTAGAGGTTTTGACCAAAGATGGAAAATGGATAAGCTACAAGCCTTCTCCTCACACTTTTGTTGTCATGATTGGTGAATCTCTCCATGCATGGTCAAATGGGAGGTTGCATTCACCCTTTCACAGAGTGATGATGAGTGGAAATGAAGCAAGATATTCTGCAGGGTTGTTCTCTATACCGAAAGGAGGGAGCATAATAAAAGCACCAGAGGAGCTGGTGGATGAGGAACACCCTCTGCTTTTTAAACCCTTTGATCATGTTGAGTTTCTCAAGTATTACTACACTGAACAAGGACAGAGAGACCAGTCTCCACTGCACACTTACTGTGGTGTCTGA 513 0.4366 MVLESMGVEKYLEEHMNSTNYLLRVMKYKAPQTTDTKIGLTTHSDKNTVTILYQNGVEGLEVLTKDGKWISYKPSPHTFVVMIGESLHAWSNGRLHSPFHRVMMSGNEARYSAGLFSIPKGGSIIKAPEELVDEEHPLLFKPFDHVEFLKYYYTEQGQRDQSPLHTYCGV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02812 170 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 18 119 IPR005123 -
Vimu11g02812 170 SUPERFAMILY Clavaminate synthase-like 2 156 - -
Vimu11g02812 170 Gene3D - 1 151 IPR027443 -
Vimu11g02812 170 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 150 - -
Vimu11g02812 170 Pfam 2OG-Fe(II) oxygenase superfamily 14 116 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02812 Vimu-Chr11 48202015 48203984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02812 1 137 Glycosyltransferase AT5G59530 29.787 1.18e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02812 - - gmx:100784444 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02812 11 48202015 48203984 Vimu11g02812 11 48202015 48203984 ECH