Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02811 ATGATGATTTCGAAAAACATTTGTCAGGTTCCTGTAGTAGACTTCACTGATAAGGAGATGAAACCAGGTACAACGAAGTGGGTTTCAGCATGCAAAGTGATCCGAAATGCACTTGAAGATCATGGTTGTTTTTATGCGTTGTATGATAAAGTTCCTACGCAGCTTTACAACTCAGTTTTTACTCTAATGGAAGAACAATTTGATCTTCCATTGGAAACAAAAATGCAAAAGATCAGTGACAAACCCTACCATGGTTACTATGGACAAAATGCTCATGTCCCTCTGTATGAATCCCTAGGGATCAACGATCCATTGAGCACAGAAGAAATTCAGAAGTTCACCAAACTAATGTGGCCAGCAGGACATGATCATTTCTGTGAGACTATGAGTCTGTATGCAAAGCTGGTTGTAGAATTGGATCATATGAGTAAAAGAATGGTGTTTGATGGGTATGGAGTTGATCAAAAGCACTGCGATTCTCTTCTGGAATCAACAAAGTACATGCTTCGGAGCTTCAAATATAGAGTGCCACAGAAGCATGAAAATAATCTGGGATTGCATGCTCACACAGACACATCATTCTTTACCATTTTGCATCAGAACAATGTAAATGGTCTGCAAGTAAAACTGAAAAATGGAGACTGGATTGACATTGATCCCTCACCCTTCATGTTTCTCATCCTTGCTGGCGATGCATTTAAGGTTTGGAGTAACGATAGAATGCAGTGTTGTGAACACCGAGTGATTATAAGTGGAGAGAAGGAAAGGTATTCTATGGGACTGTTTTCACTTGGTGGCAAGGTGGTTGAAACACAAGAAGAACTTGTTGACGAAGAACATCCAAGACAATATAAGCCATTTGATCATTATGAATACCTGCGTTTCTATGCAACAAAGAAGGCCCTTGAATCCAAGTCTCGAATCAAAGCATTCTGCGGCATAGACTATGCTGATGAGAACTGA 963 0.3988 MMISKNICQVPVVDFTDKEMKPGTTKWVSACKVIRNALEDHGCFYALYDKVPTQLYNSVFTLMEEQFDLPLETKMQKISDKPYHGYYGQNAHVPLYESLGINDPLSTEEIQKFTKLMWPAGHDHFCETMSLYAKLVVELDHMSKRMVFDGYGVDQKHCDSLLESTKYMLRSFKYRVPQKHENNLGLHAHTDTSFFTILHQNNVNGLQVKLKNGDWIDIDPSPFMFLILAGDAFKVWSNDRMQCCEHRVIISGEKERYSMGLFSLGGKVVETQEELVDEEHPRQYKPFDHYEYLRFYATKKALESKSRIKAFCGIDYADEN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02811 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 266 IPR005123 -
Vimu11g02811 320 Pfam 2OG-Fe(II) oxygenase superfamily 177 262 IPR044861 -
Vimu11g02811 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 294 - -
Vimu11g02811 320 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 4 301 - -
Vimu11g02811 320 SUPERFAMILY Clavaminate synthase-like 4 299 - -
Vimu11g02811 320 Gene3D - 8 317 IPR027443 -
Vimu11g02811 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 89 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02811 Vimu-Chr11 48196951 48198417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02811 127 311 Glycosyltransferase AT5G59530 29.319 1.40e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02811 - - gmx:100794707 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02811 11 48196951 48198417 Vimu11g02811 11 48196951 48198417 ECH