Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02807 ATGGCCGCCTTTGTTCAAACCGGGGGCCTTCTCTCTCTCCCCACCAACCCCAAATCCAGGGCTTCTCTTTCCCGTCATCTGAACCTTTCTCACGGCCTCAAAAACCGTTTTATCTCTCTGAACCCCAAACCCATCTCCGCCCCTTCTCTCTCCGCCGCCAAATTTCAACCCCTTGGCTCCAAGCCCAAAAATTTATTCATCTGCCGAGCCGAGGCGGCCGCCGCCGCAGATGGGCCGGCCCAGCCCGCCTTCGGAGAGGCCGAGGCTGAGAAGCCGAAGCTCTTGGGCATCGAGATCAGCACCTTGAAGAAAATCATCCCTTTGGGTATGATGTTCTTTTGCATCCTTTTTAATTACACGATTCTCAGAGACACCAAGGATGTCCTTGTTGTCACTGCTAGAGGGAGCAGTGCAGAGATTATTCCGTTTTTAAAAACTTGGGTGAACCTTCCCATGGCTGTTGGGTTTATGTTGTTGTACACCAAGTTGGCCAATGTTTTGTCAAAGCAAGCTCTTTTCTATTCCGTTATTCTTCCCTTCATTGCTTTTTTTGGGGCTTTTGGGTTTGTACTGTACCCTCTCAGCAACTATATTCACCCCGAGGCGTTTGCGGATAAGCTTCTCAACATCCTCGGACCAAGGTTCCTTGGCCCCCTTGCGATTATGAGAATTTGGAGTTTCTGTTTGTTCTATGTCATGGCTGAGTTGTGGGGGAGTGTCGTCATTTCCGTGCTCTTTTGGGGATTTGCTAATCAGATAACTACCGTCGAGGAAGCAAAACGATTCTACCCATTGTTTGGACTCGGGGCCAATGTAGCCCTTATTTTCTCTGGGAGGACTGTGAAATACTTTTCTAACCTGAGGCAGAATTTGGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGCAATGATGAGTATAGTTGTGGGTATGGGTTTGGCAATCTGTTTCCTGTACTGGTGGGTGAATAACTATGTTCCTCTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCAAAAATGGGTACAATGGAGAGTTTGAAGTTCTTGGTGTCTTCCAAGTACATCAGAGATCTTGCTACTTTAGTGGTTGCTTATGGAATCAGCATCAATCTTGTTGAGGTTACTTGGAAGTCTAAGCTCAAAGCTCAATTTCCTAGCCCCAACGAGTACTCTTCTTTTATGGGCGACTTCTCAACTGCAACTGGAATTGCCACATTCACAATGATGCTTGTGAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCGACAATCACCCCTACGGTCCTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTTTTATTGTTCGGTGGCCCACTTGCACCTGGTCTTGCACAGTTTGGAATGACTCCACTTCTAGCAGCTGTATATGTAGGTGCTTTGCAGAACATATTTAGCAAGAGTGCCAAGTACAGTTTGTTTGATCCCTGCAAAGAAATGGCCTACATTCCATTGGATGAGGATACCAAGGTTAAAGGCAAGGCAGCCATTGATGTTGTGTGCAACCCGTTGGGGAAGTCTGGAGGTGCCCTTATTCAGCAATTTATGATCTTAAGTTTTGGGTCACTTGCAAATTCAACCCCATACCTAGGAGGAGTGCTTCTGCTGATTGTTTCAGCCTGGTTAGCAGCAGCCAAATCGTTGGACACCCAGTTTACTGCATTGCGTAAAGAGGAAGAACTGGAGAAAGAGATGGAAAGAGCAGCCGCCGTTAAGATACCAGTGGTGGCTGAGAATGACGGTGGAAATGGTTCTCTTGCAACTGGTGCACCCTTAGATCCAGCCTCAGATGACTCCTCAAGTAGTCCATCCGAAGCCTCCTCTCCTCGCAACATTTGA 1872 0.4722 MAAFVQTGGLLSLPTNPKSRASLSRHLNLSHGLKNRFISLNPKPISAPSLSAAKFQPLGSKPKNLFICRAEAAAAADGPAQPAFGEAEAEKPKLLGIEISTLKKIIPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAVGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKRFYPLFGLGANVALIFSGRTVKYFSNLRQNLGPGVDGWAISLKAMMSIVVGMGLAICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLVSQFIFDKYGWGVAATITPTVLLLTGVGFFSLLLFGGPLAPGLAQFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGGVLLLIVSAWLAAAKSLDTQFTALRKEEELEKEMERAAAVKIPVVAENDGGNGSLATGAPLDPASDDSSSSPSEASSPRNI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02807 623 MobiDBLite consensus disorder prediction 605 623 - -
Vimu11g02807 623 Pfam TLC ATP/ADP transporter 92 563 IPR004667 GO:0005471|GO:0006862|GO:0016020
Vimu11g02807 623 SUPERFAMILY MFS general substrate transporter 105 555 IPR036259 -
Vimu11g02807 623 PANTHER - 55 622 IPR004667 GO:0005471|GO:0006862|GO:0016020
Vimu11g02807 623 NCBIfam NTP/NDP exchange transporter 97 563 IPR004667 GO:0005471|GO:0006862|GO:0016020
Vimu11g02807 623 MobiDBLite consensus disorder prediction 587 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02807 Vimu-Chr11 48160306 48168028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02807 1 598 Organic Solute Cotransporters AT1G80300 78.699 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02807 K03301 - gmx:100793284 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02807 11 48160306 48168028 Vimu11g02807 11 48160306 48168028 ECH