Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02800 ATGGCGACTTCCTTGTCAAACATGTTCTTCAAGGGGCTCGCTAATCGTTCTTTCGGAAGGCCCTTAAATGGGTTGTTTTATTGCACAAGATACTCAACTACTGTATCAAATGATTCTGAGACGCATGATGACTTCAAGCCAGCTAATAAGCTTGAGGGTTCTGGCATTTCTTTGGCAAATGTTATTGAGCAGGATGTCAAGGATAACCCTGTTATGGTTTACATGAAAGGTGTGCCTGATTTGCCACAGTGTGGTTTTAGCTCACTTGCTGTTAGAGTTTTGAAACATTATGATGTTCCTATAAGCGCTAGAAACATTTTGGAGGATGTTGAGCTAAAAAATGCTGTAAAAGCCTTTAGTTTCTCATTGTTGTGGGATAAAAGTCTTCATGGACCTTTGGCAATTGAATTTCAGTTTCCAATATCTCCAGCCCAACTTCAACATTACAAGACTGATTTTAACAGCACTAGGCTTCCAAGTGCAGTGCAACAAGCTGCAAAGGTTTACACAGCTCTGACTTTGAACTCCTTCTCAGCCAAACATTTCTTCAATGACAGCTTCACTCAAGTCCATACGCACTATCCAAGTTCCCTAGTCTTCTCCTTGTTCTTTCCGTGCAGTAACTGGCCGACATTTCCTCAAATTTTCATCAAGGGAGAGTTTATTGGTGGATCAGATATTATTCTCAACATGCACCAGACTGGTGAATTGAAGGAAAAGCTTAAAGATATTACTTCCAAGAAGTAA 747 0.4029 MATSLSNMFFKGLANRSFGRPLNGLFYCTRYSTTVSNDSETHDDFKPANKLEGSGISLANVIEQDVKDNPVMVYMKGVPDLPQCGFSSLAVRVLKHYDVPISARNILEDVELKNAVKAFSFSLLWDKSLHGPLAIEFQFPISPAQLQHYKTDFNSTRLPSAVQQAAKVYTALTLNSFSAKHFFNDSFTQVHTHYPSSLVFSLFFPCSNWPTFPQIFIKGEFIGGSDIILNMHQTGELKEKLKDITSKK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02800 248 Gene3D Glutaredoxin 179 248 - -
Vimu11g02800 248 Pfam Glutaredoxin 71 120 IPR002109 -
Vimu11g02800 248 SUPERFAMILY Thioredoxin-like 58 120 IPR036249 -
Vimu11g02800 248 Gene3D Glutaredoxin 61 125 - -
Vimu11g02800 248 ProSiteProfiles Glutaredoxin domain profile. 59 248 - -
Vimu11g02800 248 PANTHER GLUTAREDOXIN FAMILY MEMBER 31 120 IPR004480 -
Vimu11g02800 248 SUPERFAMILY Thioredoxin-like 201 244 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02800 Vimu-Chr11 48111753 48115365 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02800 - - gmx:100527610 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02800 11 48111753 48115365 Vimu11g02800 11 48111753 48115365 ECH