Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02796 ATGAAAACAATGGCGTCGTTATTCTCTGCAACTGCAGCCGTTATTCCTCGAAACCTCGCCGTCGCTTCTTCCGCCAAACACCCCGTCGGTCATTCTCTTCCTTATTCTTCTCCGCGCTTCCTCTCATTCCCCACTCCCAAATCAAACCCTCACATTCGCCTCACCGCTTCTCTCCAATCCCCACGCGCCCACGCCAGCGCGTCTTCCTCTCCCTCCGCCACCTTCCACGGCCTCTGCTATGTCGTCGGCGACAACATCGACACCGACCAGATAATCCCCGCGGAATACCTAACCCTCGTTCCTTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTAGTCGGCCTCCCCGCCTCCTACGCCACGCGTTTCGTTGAACCCGGCGAGACCAAGACCAAGTACGCCATCGTCATCGGCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCACCCGTCGCATTGGGCGCCTCCGGCGCTGCCGCTGTTGTCGCGGAGTCGTACGCCCGGATCTTTTTTCGGAACTCGGTGGCCACAGGCGAGGTGTACCCGCTGGAGTCGGAGACCCGCCTGTGCGAGGAGTGCCGCACCGGTGATGTTGTCACGATTGAGCTCGGAGAGAGCCGCTTGATCAATCACACCACTGGAAAGGAGTATCGGTTGAAGCCGATCGGCGACGCGGGTCCGGTGATTGAGGCTGGTGGCATCTTTGCCTATGCGAGGAAGTCGGGCATGATTCCATCTCGTTGA 759 0.6074 MKTMASLFSATAAVIPRNLAVASSAKHPVGHSLPYSSPRFLSFPTPKSNPHIRLTASLQSPRAHASASSSPSATFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPASYATRFVEPGETKTKYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESETRLCEECRTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKSGMIPSR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02796 252 CDD IPMI_Swivel 81 208 IPR033940 -
Vimu11g02796 252 Pfam Aconitase C-terminal domain 135 183 IPR000573 -
Vimu11g02796 252 FunFam Isopropylmalate/citramalate isomerase small subunit 72 248 - -
Vimu11g02796 252 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 71 250 - -
Vimu11g02796 252 NCBIfam 3-isopropylmalate dehydratase, small subunit 79 245 IPR011827 GO:0016836
Vimu11g02796 252 Gene3D Aconitase, domain 4 72 248 IPR015928 -
Vimu11g02796 252 SUPERFAMILY LeuD/IlvD-like 75 249 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02796 K01704 - gmx:100782688 387.882